TCONS_00004732-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004732-protein
Unique NameTCONS_00004732-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length216

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004732-protein ID=TCONS_00004732-protein|Name=TCONS_00004732-protein|organism=Clytia hemisphaerica|type=polypeptide|length=216bp
MAAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGT
RIVEVASHKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYN
HLSSWLTDARNLTNPNTVIIMIGNKSDLEAQRDVTYEEAKQFADENGLLF
LEASAKTGDNVEDAFLETAKKIFQSIQDGSLDLNAAESGVQHKPAKKGGP
SPFPQENPQGKDSCNC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002680XLOC_002680Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004732TCONS_00004732Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 115..128
score: 45.92
coord: 35..51
score: 31.54
coord: 150..172
score: 44.25
coord: 53..75
score: 52.96
coord: 12..33
score: 50.11
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 12..175
e-value: 4.2E-104
score: 361.8
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 14..175
e-value: 1.6E-9
score: 3.1
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 17..214
e-value: 5.8E-6
score: 35.2
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 9..175
e-value: 3.2E-25
score: 99.8
NoneNo IPR availableGENE3D3.40.50.300coord: 76..173
e-value: 8.1E-37
score: 124.8
NoneNo IPR availableGENE3D3.30.70.1390coord: 11..75
e-value: 2.8E-26
score: 90.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..216
NoneNo IPR availablePROSITEPS51419RABcoord: 7..216
score: 35.485
NoneNo IPR availableCDDcd04122Rab14coord: 10..175
e-value: 4.93391E-124
score: 350.29
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 11..165
e-value: 5.7E-32
score: 108.7
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 13..173
e-value: 2.5E-59
score: 199.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 8..181

Blast
[Close]
BLAST of TCONS_00004732-protein vs. Swiss-Prot (Human)
Match: RAB14 (Ras-related protein Rab-14 OS=Homo sapiens GN=RAB14 PE=1 SV=4)

HSP 1 Score: 392.504 bits (1007), Expect = 5.790e-141
Identity = 186/216 (86.11%), Postives = 198/216 (91.67%), Query Frame = 0 
Query:    1 MAAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIVEVASHKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIIMIGNKSDLEAQRDVTYEEAKQFADENGLLFLEASAKTGDNVEDAFLETAKKIFQSIQDGSLDLNAAESGVQHKPAKKGGPSPFPQENPQGKDSCNC 216
            MA  PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRI+EV+  KIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVII+IGNK+DLEAQRDVTYEEAKQFA+ENGLLFLEASAKTG+NVEDAFLE AKKI+Q+IQDGSLDLNAAESGVQHKP+   G     +  PQ ++ C C
Sbjct:    1 MATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQHKPSAPQGGRLTSEPQPQ-REGCGC 215
The following BLAST results are available for this feature:
BLAST of TCONS_00004732-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RAB145.790e-14186.11Ras-related protein Rab-14 OS=Homo sapiens GN=RAB1... [more]
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