TCONS_00005109-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00005109-protein
Unique NameTCONS_00005109-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length632

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005109-protein ID=TCONS_00005109-protein|Name=TCONS_00005109-protein|organism=Clytia hemisphaerica|type=polypeptide|length=632bp
MFAQKLKSSCKFISVSFGFVTAFVTHQYQQTFGEKIDQHVNKNLDVLHHW
VELRSKMAYEKTESFLIKYCQWLSKSTLFHKMDMTSLLIFLAENQNTTFL
HGICIKLLSTIEFPQDVDMEYYLKKCDSNTLIGLARSHDVNLKWFSNEDI
LPRELTEESGFQLSREIQQLIHDIQSSLENDEDPDSQPQCSTWLFQKVIN
EHLPDEPIPNLMNDLSTGRDHHSLSHEKTDVLSTNILFDYLKILRQFTAN
DKVSSNPDLSASVLNVVRDIVAFYDDEGNPDRKSVLEKCGNIVANLSCTD
ANREAVIQRGYLPLFMNWKSSTDNTLKIVADRALTNLDFQTSVKKLCDGI
YVLHPNCRSADEAIVDVVFVHGIQGSPFHTWRQRQAFDQAMYTDCWPKDW
LPEDYPNIRVIGVHYESFFSDWYSSCPVDNEKRSLENKAIAIKEKLKEFG
VGERPIVWVTHSLGGLITKRMLSLSNSCEDTSNFLSSTKGLVFYSVPHLG
SPFATTTGRARFVLFPSKEVSEIEENAEGLKKLHQDFSELARKFKIECLD
FGESKPYKLPYVQYAQVIVPSTSSNVGYGRFMLLDSNHQDVCKPVNKVDP
RYWEVSAMIRRVLQENEKTEDNELFKSMSTVE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002905XLOC_002905Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005109TCONS_00005109Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029058Alpha/Beta hydrolase foldGENE3D3.40.50.1820coord: 356..628
e-value: 5.0E-25
score: 87.8
IPR029058Alpha/Beta hydrolase foldSUPERFAMILY53474alpha/beta-Hydrolasescoord: 366..596
NoneNo IPR availableGENE3D1.25.40.150coord: 20..341
e-value: 6.4E-4
score: 19.3
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 234..364

Blast
[Close]
BLAST of TCONS_00005109-protein vs. Swiss-Prot (Human)
Match: SRAC1 (Protein SERAC1 OS=Homo sapiens GN=SERAC1 PE=1 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 1.857e-68
Identity = 119/335 (35.52%), Postives = 195/335 (58.21%), Query Frame = 0 
Query:  291 NIVANLSCTDANREAVIQRGYLPLFMNWKSSTDNTLKIVADRALTNLDFQTSVKKLCDGIYVLHPNCRSADEAIVDVVFVHGIQGSPFHTWRQR---QAF------DQAMYTDCWPKDWLPEDYPNIRVIGVHYESFFSDWYSSCPVDNEKRSLENKAIAIKEKLKEFGVGERPIVWVTHSLGGLITKRMLSLSNSCEDTSNFLSSTKGLVFYSVPHLGSPFATTTGRARFVLFPSKEVSEIEENAEGLKKLHQDFSELARKFKIECLDFGESKPYKLPYVQYAQVIVPSTSSNVGYGRFMLLDSNHQDVCKPVNKVDPRYWEVSAMIRRVLQEN 616
             ++ N++  +    ++++ G++ +      S        A R L NLD +T  +K  DG+YVLHP  R++     DV+F+HG+ G+ F TWRQ+   QA       D+  YT CWPK WL +D P +R+I V Y++  SDW + CP+  E++S+  ++  +  KL+  GVG+RP+VW++HS+GGL+ K+ML  +++  + S  +++T+G++FYSVPH GS  A  +   R++LFPS EV E+ +++  LK L  DF E A+    + L+F E+ P  +  +    V VP  S+++G G  + +D NH ++CKP  K    Y      IR  L ++
Sbjct:  320 RVIGNMALNEHLHSSIVRSGWVSIMAEAMKSPHIMESSHAARILANLDRETVQEKYQDGVYVLHPQYRTSQPIKADVLFIHGLMGAAFKTWRQQDSEQAVIEKPMEDEDRYTTCWPKTWLAKDCPALRIISVEYDTSLSDWRARCPM--ERKSIAFRSNELLRKLRAAGVGDRPVVWISHSMGGLLVKKMLLEASTKPEMSTVINNTRGIIFYSVPHHGSRLAEYSVNIRYLLFPSLEVKELSKDSPALKTLQDDFLEFAKDKNFQVLNFVETLPTYIGSMIKLHV-VPVESADLGIGDLIPVDVNHLNICKPKKKDAFLYQRTLQFIREALAKD 651
The following BLAST results are available for this feature:
BLAST of TCONS_00005109-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SRAC11.857e-6835.52Protein SERAC1 OS=Homo sapiens GN=SERAC1 PE=1 SV=1[more]
back to top