TCONS_00005139-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00005139-protein
Unique Name	TCONS_00005139-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	551

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00005139-protein ID=TCONS_00005139-protein|Name=TCONS_00005139-protein|organism=Clytia hemisphaerica|type=polypeptide|length=551bp
MSSVSVISAGSQASTRSNASRIKSRRYRVTSHTSQVDESLFGTRSTSAPN
ERNNNNEPAAVKTKTRTTSAPKKQEVIQVITKDMIRKLRVPREDPSGQSL
VLQSNHFFRIRNSARVLTKKEREEVMEYMKSEKKKLQDESEDRKHFMQNM
EQKRLKNEKLSDLEQEAKEKSQYLLQKAHEQMEEQEDEIKKLNELILNAK
CHAIRDNQLIEKMEIKKEILEEDKRLDQMMESDRLRVLAAYEDRDSSKRM
ERFKGAQVLHQQIEENEQSRLLEQEKKDQETKAMLQYLEKLKHEDMDALI
KKRDNQKTILKDVARANDEIQKMKDFQKEREKMEDQKVMEYLKDKQAREE
AYEKEKEQARLEKEKEIARLRAQQERAKDKQAEKDALRARRNQEEAEREW
RKKVKEEATKKASMESHLREARKEQIQNKEHFFAVQAARDRAEFERVLNA
QFEQVEREKVVEDDFQQRRAVYAEDVRTQIKEKEKERVHARQSFFHEGIK
LDQEAKERRQKLDEIKRRKLKELEEAGVPNKYVTEVARRIEAQPPTLSNM
F

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_002931	XLOC_002931	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00005139	TCONS_00005139	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR009056	Cyt_c-like_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0020037	heme binding
GO:0009055	electron carrier activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0020037	heme binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 342..399
None	No IPR available	COILS	Coil	Coil	coord: 316..336
None	No IPR available	COILS	Coil	Coil	coord: 473..493
None	No IPR available	COILS	Coil	Coil	coord: 119..139
None	No IPR available	COILS	Coil	Coil	coord: 404..424
None	No IPR available	COILS	Coil	Coil	coord: 150..202
None	No IPR available	PFAM	PF13868	TPH	coord: 183..529 e-value: 3.2E-84 score: 282.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 372..423
IPR009056	Cytochrome c-like domain	GENE3D	1.10.760.10		coord: 144..298 e-value: 0.37 score: 10.6

Blast

[Close]

BLAST of TCONS_00005139-protein vs. Swiss-Prot (Human)
Match: CFA45 (Cilia- and flagella-associated protein 45 OS=Homo sapiens GN=CFAP45 PE=1 SV=2)

HSP 1 Score: 370.548 bits (950), Expect = 3.208e-122
Identity = 239/531 (45.01%), Postives = 357/531 (67.23%), Query Frame = 0

Query:   26 RYRVTSHTSQVDESLFGTRSTSAPNERNNNNEPAAV----KTKTRTTSA---PKKQEVIQVITKDMIRKLRVPREDPSGQSLVLQSNHFFRIRNSARVLTKKEREEVMEYMKSEKKKLQDESEDRKHFMQNMEQKRLKNEKLSDLEQEAKEKSQYLLQKAHEQMEEQEDEIKKLNELILNAKCHAIRDNQLIEKMEIKKEILEEDKRLDQMMESDRLRVLAAYEDRDSSKRMERFKGAQVLHQQIEENEQSRLLEQEKKDQETKAMLQYLEKLKHEDMDALIKKRDNQKTILKDVARANDEIQKMKDFQKEREKMEDQKVMEYLKDKQAREEAYEKEKEQARLEKEKEIARLRAQQERAKDKQAEKDALRARRNQEEAEREWRKKVKEEATKKASMESHLREARKEQIQNKEHFFAVQAARDRAEFERVLNAQFEQVEREKVVEDDFQQRRAVYAEDVRTQIKEKEKERVHARQSFFHEGIKLDQEAKERRQKLDEIKRRKLKELEEAGVPNKYVTEVARRIEAQPPTLSN 549
            RYR  + +S+VDESLFG   + A   +  ++ P  +     T  +T +A    +K E IQ+IT+DM+R+L VP EDPSG+SL++    F RI+ ++ VLT++E E   +  K EK+   D    RK  M+  E     N+KLSDLE+ AKE++Q LLQ+A++   EQE+E+K ++++ILNAKCHAIRD Q++EK +I+KE+  E+KRLDQMME +R + +   E+ +  +R ER +G + + +Q+E+N++ R L  E+++QE + ML+Y+E+L+ ED+  + +++  +  +  ++ R NDE QK K     +EK+ DQ VME+ K K ARE  +E E+E+ R EKEKEIARLRA QE+A+D QAE+DALRA+RNQE A+REWR+K KE A KK   E+ LR++R EQ+  KEH  AVQ  RDR EFER+L AQ EQ+E+E++ E+     R  +A ++R Q++E +++ V  R + F EG +L +EA++RR+++DEIKR+KL+EL   G+P KY  E  R+    P T  N
Sbjct:   24 RYRTKAVSSEVDESLFGDIKSPA---QGQSDSPIVLLRDKHTLQKTLTALGLDRKPETIQLITRDMVRELIVPTEDPSGESLIISPEEFERIKWASHVLTREELEARDQAFKKEKEATMDAVMTRKKIMKQKEMVWNNNKKLSDLEEVAKERAQNLLQRANKLRMEQEEELKDMSKIILNAKCHAIRDAQILEKQQIQKELDTEEKRLDQMMEVERQKSIQRQEELERKRREERIRGRRQIVEQMEKNQEERSLLAEQREQEKEQMLEYMEQLQEEDLKDMERRQQQKLKMQAEIKRINDENQKQKAELLAQEKLADQMVMEFTKKKMAREAEFEAEQERIRREKEKEIARLRAMQEKAQDYQAEQDALRAKRNQEVADREWRRKEKENARKKMETEAELRKSRLEQVAFKEHALAVQVQRDRDEFERILRAQREQIEKERLEEEKKATGRLQHANELRRQVRENQQKEVQNRIATFEEGRRLKEEAQKRRERIDEIKRKKLEELRATGLPEKYCIEAERKANILPATSVN 551

The following BLAST results are available for this feature:

BLAST of TCONS_00005139-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00005139-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CFA45	3.208e-122	45.01	Cilia- and flagella-associated protein 45 OS=Homo ...	[more]

You are here

TCONS_00005139-protein (polypeptide) - C. hemisphaerica