Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00005447-protein ID=TCONS_00005447-protein|Name=TCONS_00005447-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1774bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00005447-protein vs. Swiss-Prot (Human)
Match: SORL (Sortilin-related receptor OS=Homo sapiens GN=SORL1 PE=1 SV=2) HSP 1 Score: 781.171 bits (2016), Expect = 0.000e+0 Identity = 517/1451 (35.63%), Postives = 754/1451 (51.96%), Query Frame = 0 Query: 56 GDPAMDEIGKRFRRAVKNDLEKIKS-SPYAFNDKHFIAEVHWSGANSSSIMVLMRDPDNLMSSSRP--SNFYVSRDYGKTYTNVTG--NFTLSDGSLATISSFFSSKADNRKYILVAKYHRVLFVSDDECKTFRRVSTTFYPSEVKYHPRYSYYVALHEKEMGSKRLYTSTNNGRYWRFKASDVESYTWSYYPPVDTTSYLYYFKHTESNSTSGGTTGILYKGSLHRSYYWYSSWRNSYYNRIMVSGIQDYTMVNQFIFAVK-----NGTKNGTKNLLVSTNRNGFESTNFPFTNSTSMLSLNFLVADASENETFVAVAFNNKTANLYISDFEGKKYSLALENVLYFNKQDKGVNRFFRH----DFVELHRVLGVSGVYIATNLTQGKPGTRHLQSWITFNKGGDWSHIVPPPELCTDSKKTGSL---CALQLSQEFG-FHNPYTRFTPIYSKKSAPGFILATGNVGPYLNSTPNVFLSTDAGISWRKILDGHYYYAFVDHGGIIVGAQKYGYTDTLKFSWDEGHSWQDYKFSKDPVRVYGLLTEPGEKSAIFTVYAS-KANGHSWFVIQVDFRQFLGRPCDKSKDYYLWELGDLRNDTQHCSLGKKQKYERRLADHKCYNGYNYDRAVEVSNCLCTREDFMCDFGFKEFVLGWFGTFCFPDINFFNATIKQPSWCQPGLLYNISSGYRKIPGDTCEGGDFDKKFLPETRACHIDPIDDFVLYAKSSYIMRYDLKSHQSVRMHLNGMKNVISLDYDYAGKTLFYADITLDRIMRMNLTTGHLHEVLQFDEERTYVEGIAYDWMNKDIYYTDVGSAEIGIISVDGRFKKKLFGPSDVGKPRGIAVHPAKGVMAWTDLGS-NPSITIANMDGSGKKNLLSTSQNIKTPNDVAFDYESNLLYWTDSGMDRIERIQLDGRGRKVIQSSGVSNPYSLDIYKQKIVWDDWSYGGVQLMDKESGDGKQNLVNWLYKPTALRAFWEGKQKLDNNPCAPGHHNCTFKCLP-ANGKPSCVCPEGLKPV---SGPLQCKCPNEEVFDRKTNACRPPKNETCTAHQFTCTHSKECIPDHWKCDGDKDCGDGSDEWGCAAPEVCKVN-QFRCA-NGACILRSWKCDNEEDCSDGSDEKNCTTAGCAVGHVKCPTSECIPNNWVCDGEDDCADGWDEKDCSQTTTVRPTVVCPATQFGCIKYNRYRCLSNSFKCNGDNDCDDGSDER--GCAKVICSALERNCDNGLQCIARRYWCNGWPDCNDGSDENNCAFTTPPRPTSPEICSGNGTYPCDNRRRCYGPEQRCNGIPDCNDGADEKGCPTRTTPRPTIPGKCK--GYQCKKSVNCIGYHQTCDGRTDCPHGDDEWPASCA-------CT----FRCPDNNACATR--CNGIPECKGKEDEAKC-DTEKGKVDCALPS---PFSKKC-DGSCFNITVMCDDQALCDDASDEPA 1458 G DE R +R+ E IK + ND H VHW+G S+ I+ L RD ++ +RP S+ YVS DYGK++ ++ NF L + S A I+ F+ S ADN++YI Y + L+++ D C T + S F +++ H + S + ++ +K+L+ S + G+ W V+S++W P D + +Y +H S ++ + RS ++ S N +++ ++D+ + ++++FA K + + L VS R + F + + + +ADASE++ FV V+ +N NLYIS+ EG K+SL+LENVLY++ G + R+ F + HRV G+ GVYIAT L G +++S ITF+KGG W + P K L C+L L+Q N R PI SK+SAPG I+ATG+VG L S NV++S+ AG WR+ L G +YY + DHGGII + T+ LK+S +EG +W+ + FS+ PV VYGLLTEPGEKS +FT++ S K N HSW ++QV+ LG PC ++ DY LW D R + C LG K ++RR C+NG ++DR V VSNC CTRED+ CDFGFK C PD F + P C G Y + GYRKI GDTC GGD + + E C + ++F+LYA I RYDL S + ++ L G++ ++LD+DY L+++D+ LD I R+ L EV+ + VE +A++ +++ +Y+ D G +I + + DG F+ + S + +PR + + P +GVM WTD G P I +NMDGS +L+ S+++K PN ++ D +YWTD+ ++ IERI G+ R VI + + +PY++ ++K +I WDDWS + K SG + L N L ++ F++GK +N C P C+ CLP AN SC CPE + SG L C CP + + K N C +N TC +Q+ C++ CI W CD D DCGD SDE C +C ++ QFRC +G CI S+KCD E+DC D SDE +C C C + CI ++WVCDG++DC D DE +C T + T C A+ F C C+ + C+GD DC DGSDE C K C+ C NG CI C+G DC+DGSDE +C +C+ + C NR++C C+GI C DG+DE + P C G+QC+ V CI CDG DC DE A+C C+ FRC + + R C+ +C DE C D+ PS P +C G+C T +CD C D SDE A Sbjct: 68 GASRADEKPLRRKRSAALQPEPIKVYGQVSLNDSHNQMVVHWAGEKSNVIVALARDS---LALARPKSSDVYVSYDYGKSFKKISDKLNFGLGNRSEAVIAQFYHSPADNKRYIFADAYAQYLWITFDFCNTLQGFSIPFRAADLLLHSKASNLLLGFDRSHPNKQLWKSDDFGQTWIMIQEHVKSFSWGI-DPYDKPNTIYIERHEPSGYST-----------VFRSTDFFQSREN---QEVILEEVRDFQLRDKYMFATKVVHLLGSEQQSSVQLWVSFGRKPMRAAQFVTRHPIN----EYYIADASEDQVFVCVSHSNNRTNLYISEAEGLKFSLSLENVLYYSPGGAGSDTLVRYFANEPFADFHRVEGLQGVYIAT-LINGSMNEENMRSVITFDKGGTWEFLQAPAFTGYGEKINCELSQGCSLHLAQRLSQLLNLQLRRMPILSKESAPGLIIATGSVGKNLASKTNVYISSSAGARWREALPGPHYYTWGDHGGIITAIAQGMETNELKYSTNEGETWKTFIFSEKPVFVYGLLTEPGEKSTVFTIFGSNKENVHSWLILQVNATDALGVPCTEN-DYKLWSPSDERGN--ECLLGHKTVFKRRTPHATCFNGEDFDRPVVVSNCSCTREDYECDFGFK-MSEDLSLEVCVPDPEFSGKSYSPPVPCPVGSTYRRTRGYRKISGDTCSGGDVEARLEGELVPCPLAEENEFILYAVRKSIYRYDLASGATEQLPLTGLRAAVALDFDYEHNCLYWSDLALDVIQRLCLNGSTGQEVI-INSGLETVEALAFEPLSQLLYWVDAGFKKIEVANPDGDFRLTIVNSSVLDRPRALVLVPQEGVMFWTDWGDLKPGIYRSNMDGSAAYHLV--SEDVKWPNGISVD--DQWIYWTDAYLECIERITFSGQQRSVILDN-LPHPYAIAVFKNEIYWDDWSQLSIFRASKYSGSQMEILANQLTGLMDMKIFYKGKNT-GSNACVP--RPCSLLCLPKANNSRSCRCPEDVSSSVLPSGDLMCDCP--QGYQLKNNTCVKQEN-TCLRNQYRCSNGN-CINSIWWCDFDNDCGDMSDERNCPT-TICDLDTQFRCQESGTCIPLSYKCDLEDDCGDNSDESHCEMHQCRSDEYNCSSGMCIRSSWVCDGDNDCRDWSDEANC---TAIYHT--CEASNFQC---RNGHCIPQRWACDGDTDCQDGSDEDPVNCEKK-CNGFR--CPNG-TCIPSSKHCDGLRDCSDGSDEQHCE----------PLCTHFMDFVCKNRQQCLFHSMVCDGIIQCRDGSDEDAAFAGCSQDPEFHKVCDEFGFQCQNGV-CISLIWKCDGMDDCGDYSDE--ANCENPTEAPNCSRYFQFRCENGHCIPNRWKCDRENDCGDWSDEKDCGDSHILPFSTPGPSTCLPNYYRCSSGTCVMDTWVCDGYRDCADGSDEEA 1452 HSP 2 Score: 160.229 bits (404), Expect = 4.298e-39 Identity = 120/370 (32.43%), Postives = 149/370 (40.27%), Query Frame = 0 Query: 1080 TCTAHQFTCTHSKECIPDHWKCDGDKDCGDGSDEWGCAAPEVC--KVNQFRCANGACILRSWKCDNEEDCSDGSDEKNC---------------------------------------TTAGCAVG----------HVKCPTSECIPNNWVCDGEDDCADGWDEKDCSQTTTVRPTVVCPATQFGCIKYNRYRC-----LSNSFKCNGDNDCDDGSDERGCAKV-----------ICSALERNCDNGLQCIARRYWCNGWPDCNDGSDENNCAF----TTPPRPTSPEICSGNGTYPCDNRRRCYGPEQRCNGIPDCNDGADEKGCPTRTTPRPTIPGKCKGYQCKKSVNCIGYHQTCDGRTDCPHGDDE 1378 TC A F C + CIP W CDGD DC DGSDE P C K N FRC NG CI S CD DCSDGSDE++C AGC+ +C CI W CDG DDC D DE +C P C +Y ++RC + N +KC+ +NDC D SDE+ C C C +G C+ + C+G+ DC DGSDE C T PT C + C + C +RC+G DC DG DE CPT + T+ + +QC+ CI + CDG DC DE Sbjct: 1198 TCEASNFQCRNG-HCIPQRWACDGDTDCQDGSDE----DPVNCEKKCNGFRCPNGTCIPSSKHCDGLRDCSDGSDEQHCEPLCTHFMDFVCKNRQQCLFHSMVCDGIIQCRDGSDEDAAFAGCSQDPEFHKVCDEFGFQCQNGVCISLIWKCDGMDDCGDYSDEANCEN----------PTEAPNCSRYFQFRCENGHCIPNRWKCDRENDCGDWSDEKDCGDSHILPFSTPGPSTCLPNYYRCSSG-TCVMDTWVCDGYRDCADGSDEEACPLLANVTAASTPTQLGRCD-RFEFECHQPKTCIPNWKRCDGHQDCQDGRDEANCPTHS----TLTCMSREFQCEDGEACIVLSERCDGFLDCSDESDE 1546 HSP 3 Score: 153.68 bits (387), Expect = 4.381e-37 Identity = 102/285 (35.79%), Postives = 131/285 (45.96%), Query Frame = 0 Query: 1086 FTCTHSKECIPDHWKCDGDKDCGDGSDE----WGCAA-PE---VCKVNQFRCANGACILRSWKCDNEEDCSDGSDEKNCTTAGCAVG-----HVKCPTSECIPNNWVCDGEDDCADGWDEKDCSQTTTVRPTVVCPATQFGCIKYNRYRCLS-----NSFKCNGDNDCDDGSDERGCAKVI-------------CSALERNCDNGLQCIARRYWCNGWPDCNDGSDENNCAFTTPPRPTSPEICSGNGTYPCDNRRRCYGPEQRCNGIPDCNDGADEKGCPTRTT 1339 F C + ++C+ CDG C DGSDE GC+ PE VC F+C NG CI WKCD +DC D SDE NC A +C CIPN W CD E+DC D DEKDC + + + P+T C+ N YRC S +++ C+G DC DGSDE C + C E C CI C+G DC DG DE NC PT + + + C++ C +RC+G DC+D +DEK C T Sbjct: 1281 FVCKNRQQCLFHSMVCDGIIQCRDGSDEDAAFAGCSQDPEFHKVCDEFGFQCQNGVCISLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYFQFRCENGHCIPNRWKCDRENDCGDWSDEKDCGDSHILPFSTPGPST---CLP-NYYRCSSGTCVMDTWVCDGYRDCADGSDEEACPLLANVTAASTPTQLGRCDRFEFECHQPKTCIPNWKRCDGHQDCQDGRDEANC-------PTHSTLTCMSREFQCEDGEACIVLSERCDGFLDCSDESDEKACSDELT 1554 HSP 4 Score: 115.931 bits (289), Expect = 1.276e-25 Identity = 72/205 (35.12%), Postives = 99/205 (48.29%), Query Frame = 0 Query: 1066 FDRKTNACRPPKNETCTAH-QFTCTHSKECIPDHWKCDGDKDCGDGSDEWGCA----------APEVCKVNQFRCANGACILRSWKCDNEEDCSDGSDEKNC------TTAGCAVGHVKCPTSE--------CIPNNWVCDGEDDCADGWDEKDCSQTTTVRPTVVCPATQFGCIKYNRYRCLSNSFKCNGDNDCDDGSDERGCA 1245 + + N P + C+ + QF C + CIP+ WKCD + DCGD SDE C P C N +RC++G C++ +W CD DC+DGSDE+ C T A +C E CIPN CDG DC DG DE +C T+ C + +F C + C+ S +C+G DC D SDE+ C+ Sbjct: 1353 YSDEANCENPTEAPNCSRYFQFRCENG-HCIPNRWKCDRENDCGDWSDEKDCGDSHILPFSTPGPSTCLPNYYRCSSGTCVMDTWVCDGYRDCADGSDEEACPLLANVTAASTPTQLGRCDRFEFECHQPKTCIPNWKRCDGHQDCQDGRDEANCP----THSTLTCMSREFQC--EDGEACIVLSERCDGFLDCSDESDEKACS 1550 The following BLAST results are available for this feature:
BLAST of TCONS_00005447-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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