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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00005844-protein ID=TCONS_00005844-protein|Name=TCONS_00005844-protein|organism=Clytia hemisphaerica|type=polypeptide|length=415bp
MYARINTRTLQRKRHRFQLLIVKVQNERGTYFYVQVYYAQLDSNGNWDPA
VTFKDQQCKQAQFGVGVETFARFNFNGVYNPGFPLPAIAECVTNEYPYTD
LGSWVFDVSDKKVTNQPVPPSGRCDSKFGSLDPKCYLKGFAEKKREGMKG
VVGPTDPPKPTTMTTTTTIPPTKPTKTTSTTTTTVPTKPTETSTTTKTTT
TIAPTTTTASTTTTASTTTTTTTTTATTSTTSGPTTKTTPMVITTDPIVD
EKVRRLANKFCKNRDAGLYQLPVICDVFVSCSLGSEAEPMVCPEGTNFNP
EFKTCDHSDNFECFYDNVTLTELTNVTAPPPKHDNLCHFLGFGEYADPNS
CDKYYACTNSRSILMPCPAGLHYKPLNETSGICDWKRNVQCTGEGRRPPT
SAPTTTYHPRNLGHR Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR002557 | Chitin-bd_dom |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005576 | extracellular region |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006030 | chitin metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008061 | chitin binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006030 |
chitin metabolic process |
| cellular_component |
GO:0005576 |
extracellular region |
| molecular_function |
GO:0008061 |
chitin binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR002557 | Chitin binding domain | SMART | SM00494 | chi_10 | coord: 335..393
e-value: 1.3E-11
score: 54.5
coord: 259..315
e-value: 3.5E-8
score: 43.2 |
| IPR002557 | Chitin binding domain | PFAM | PF01607 | CBM_14 | coord: 261..313
e-value: 1.6E-9
score: 37.7
coord: 340..391
e-value: 2.6E-13
score: 49.8 |
| IPR002557 | Chitin binding domain | GENE3D | 2.170.140.10 | | coord: 327..402
e-value: 2.9E-15
score: 55.4
coord: 251..326
e-value: 2.3E-10
score: 39.7 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 334..393
score: 13.253 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 258..315
score: 11.934 |
| IPR002557 | Chitin binding domain | SUPERFAMILY | 57625 | Invertebrate chitin-binding proteins | coord: 329..398 |
| IPR002557 | Chitin binding domain | SUPERFAMILY | 57625 | Invertebrate chitin-binding proteins | coord: 257..318 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 393..415 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 147..241 |
Blast
The following BLAST results are available for this feature:
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