TCONS_00005895-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00005895-protein
Unique NameTCONS_00005895-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length520

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005895-protein ID=TCONS_00005895-protein|Name=TCONS_00005895-protein|organism=Clytia hemisphaerica|type=polypeptide|length=520bp
MVEHRYQKKRSVIEALKQERIIICKRKHHGEHIIMPCEECRIWLCWDSLI
DHLQLKKHNMDRLGAIDFMITLKKKIWGQNAPKARDLDDFGRRLPAVNEQ
SSCKDSQRADISTNNAQKDSNSQKSITYLPSSKTNPSLSTPSIASKPIVA
MKKSFMSDALSSLKSTGCPPINSAYTTINPTLLREALKDDKAQYEKDFSL
TKDVKSNVGEKRKSIVIDDDEDTKVINIQPSNKSKRSEPSKSNSQTLENN
SLSTDYKISAPAVDAEYEREKNISNKERIDNKASLRVVITDVKEVNIQKV
KVAASCPVCGREFKMKQMKLISHHLVRKHGFKVRQALMEEVKQTRLAKCM
KQHGGKHILLPCAVDQCDMWFCSDMSFEQHMRMKHCMSMPDVYKARDELI
KKHWDGKKVLVKEILSGISTNNKSTLNSNAKSSMEDSMISKSNTEISTRR
PTEKTTNTSKSSSSTSAGEEITTEVTRTSKSNAGMSEHITTEHTKTSKCN
TGNIITDSFMKEKTQIEKKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003362XLOC_003362Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005895TCONS_00005895Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 35..58
e-value: 220.0
score: 1.4
coord: 360..385
e-value: 0.13
score: 21.4
coord: 304..329
e-value: 46.0
score: 7.4
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 362..385
NoneNo IPR availableGENE3D2.60.260.40coord: 14..400
e-value: 0.0054
score: 16.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 421..502
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 229..253

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005895-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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