beta-catenin (polypeptide) - C. hemisphaerica

Overview
Namebeta-catenin
Unique NameTCONS_00006214-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length221

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00006214-protein ID=TCONS_00006214-protein|Name=beta-catenin|organism=Clytia hemisphaerica|type=polypeptide|length=221bp
XLLTQGDPQTVQQAAQTVNQLTKKEASCHAVMNNNVMVTALIRVATTSQD
ADTVKSTVGAMHNMSHHKQGLSGIFKSGGIPALVRLLGYRIEAVVFYTIT
TLHNLLLHQEGAKMAVRLAGGLQKMIQLLHKTNVKFLAIVTDCLQILAYG
NQESKLIILASGGPAELVRIIRTYNYEKLLYTTCRVLKVLSVCSSNKPAI
VEVCYHSILVAVFFRKCQNAL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003560XLOC_003560Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00006214TCONS_00006214Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013284Beta-catenin
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold
Vocabulary: Biological Process
TermDefinition
GO:0034333adherens junction assembly
Vocabulary: Molecular Function
TermDefinition
GO:0004871signal transducer activity
GO:0005515protein binding
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0034333 adherens junction assembly
molecular_function GO:0005488 binding
molecular_function GO:0005515 protein binding
molecular_function GO:0004871 signal transducer activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013284Beta-cateninPRINTSPR01869BCATNINFAMLYcoord: 164..188
score: 73.33
coord: 134..156
score: 92.93
coord: 14..35
score: 60.04
coord: 78..97
score: 63.54
IPR000225ArmadilloSMARTSM00185arm_5coord: 151..192
e-value: 6.4
score: 14.8
coord: 67..107
e-value: 0.018
score: 24.2
coord: 108..149
e-value: 0.015
score: 24.5
coord: 24..66
e-value: 14.0
score: 12.2
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 78..120
score: 12.407
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 120..162
score: 10.972
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 36..79
score: 9.152
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 91..211
e-value: 1.2E-16
score: 60.0
coord: 1..90
e-value: 1.7E-11
score: 43.1
NoneNo IPR availableCDDcd00020ARMcoord: 2..105
e-value: 3.78258E-5
score: 39.6052
NoneNo IPR availableCDDcd00020ARMcoord: 74..191
e-value: 9.91131E-18
score: 74.6583
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 2..209

Blast
[Close]
BLAST of beta-catenin vs. Swiss-Prot (Human)
Match: CTNB1 (Catenin beta-1 OS=Homo sapiens GN=CTNNB1 PE=1 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 1.332e-93
Identity = 141/201 (70.15%), Postives = 166/201 (82.59%), Query Frame = 0 
Query:    2 LLTQGDPQTVQQAAQTVNQLTKKEASCHAVMNNNVMVTALIRVATTSQDADTVKSTVGAMHNMSHHKQGLSGIFKSGGIPALVRLLGYRIEAVVFYTITTLHNLLLHQEGAKMAVRLAGGLQKMIQLLHKTNVKFLAIVTDCLQILAYGNQESKLIILASGGPAELVRIIRTYNYEKLLYTTCRVLKVLSVCSSNKPAIVE 202
            LL   D   V +AA  V+QL+KKEAS HA+M +  MV+A++R    + D +T + T G +HN+SHH++GL  IFKSGGIPALV++LG  +++V+FY ITTLHNLLLHQEGAKMAVRLAGGLQKM+ LL+KTNVKFLAI TDCLQILAYGNQESKLIILASGGP  LV I+RTY YEKLL+TT RVLKVLSVCSSNKPAIVE
Sbjct:  159 LLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVE 359
The following BLAST results are available for this feature:
BLAST of beta-catenin vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CTNB11.332e-9370.15Catenin beta-1 OS=Homo sapiens GN=CTNNB1 PE=1 SV=1[more]
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