TCONS_00006214 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00006214
Unique Name	TCONS_00006214
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2410

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000066:6017..9998+
coding sequence from alignment at sc0000066:6017..9998+

transcript sequence

>TCONS_00006214 ID=TCONS_00006214|Name=TCONS_00006214|organism=Clytia hemisphaerica|type=transcript|length=2410bp
TTANACTGTTGACTCAAGGTGACCCACAAACTGTCCAACAAGCTGCTCAA
ACTGTCAACCAACTTACCAAGAAGGAAGCCAGTTGCCATGCTGTTATGAA
CAACAATGTGATGGTAACCGCTTTGATTCGTGTCGCAACAACATCCCAAG
ATGCAGATACTGTCAAGTCAACTGTTGGTGCTATGCATAATATGTCCCAT
CATAAGCAAGGTTTATCTGGAATCTTTAAGAGTGGAGGTATTCCAGCTTT
GGTACGTCTTTTGGGATATCGCATTGAAGCTGTTGTTTTCTACACCATCA
CAACACTTCACAATTTGCTTCTTCATCAAGAAGGTGCTAAGATGGCTGTT
CGTCTTGCTGGTGGTTTACAAAAGATGATCCAACTCTTACATAAAACCAA
TGTCAAGTTCTTGGCTATTGTTACAGattgtttacaaattttggcttATG
GAAACCAAGAATCGAAATTGATCATTCTTGCATCTGGTGGACCAGCAGAG
CTTGTCCGTATCATTCGAACATACAACTACGAGAAATTGTTGTACACCAC
TTGCCGTGTCTTGAAAGTATTGTCTGTTTGCTCGAGCAATAAACCAGCTA
TTGTTGAGGTATGCTATCATTCAATTCTTGTTGCTGTTTTTTTCAGGAAA
TGCCAAAATGCTCTTTAAAAGCGCAGTGCTCCTTCTAAGAAATAGACAAT
TTAAAAACCGGATGTAGTAGNCCGATTCGTGATCAAGGAGGATTACCACG
TCTTGTTCAACTTCTCATGAAAGCTAACACAGACATTCAACGACGAGGTC
CGGGAGCGCAAAGCATGCAAGACGGTGTACGCATGGAAGAAATCATGGAA
GGAACTGTTGGCGCTTTACACATTTTGGCTCGTGAATCACTCAATCGTAC
CATCATCCGAGATCTGAACTGCATCCCTTCTTTTGTCCAGTTGTTATACT
CAGACATTGAGAATGTTGTTCGAGTAGCCGCTGGAGTTTTGTGCGAATTG
GCACAAGATAAAGAAGGGGCGGACGCGATCGAGCGTGAGAACTCTACAAC
CATCTTGACGGAGCTCCTCCATTCGCGTAACGAAGGTATTGCTGCGTACG
CGGCCGCTGTACTCTTCCGAATGTCCGAAGATAAGTCACAAGATTACAAG
AAACGTCTGTCCGTCGAATTGACCTCCTCACTATTCCGCGATGATATGCC
ATGGGAGCCTGGAAATACGGAAATGGCTGACTTGATGACAAGCCAATCTT
ACCAAGACGAACTTTACAACCCACATTTGACAACGCAACAAAGTCAAAAC
ACTTCGATGCAATACACTAACTCCTTTCAACACCAAATGTTTAATCAACA
AAACACGCCCCAACCACAGGGCGGTCAACACCCTTGGTTTGAAGAAATGT
GATAGTGCTCCGTGTTGTTTCGCAATAACTATATAACACTATTTCTGTTG
GCAAAGGAATCATTATTTTTGGTGCTAATTACGATTGACTTGAATTTACA
AAGCGGAAGCCAGATGATTTCCAATGCTTGTTTGTATTATAGTTGTGTCT
CATTTATGAACACTTTATATGTATAATATCCCCAAGAATGGCCCCACCCT
TTacatttaaagttaaaaaggcACAATATTGATATATTCACCACTTACAC
CTGTGAGCAGACCAATTCTAATCTTTTCTTGCACGGTAGTCGCTTGGTGA
GCTCAAATAAAGGAATATTGAGAAGGCCgttttgatatttatttttgtaa
cACAGTACACGTTATATTACAGTTTCTTCTGCAAAATATAtcccaaattt
ttagttttatgtgcgtgtctagtttttaagatattttatggattttaact
tttttttaaagtaagctttttgtcttttatttttcttatactttttttat
tccTCAAAAATAGACCAATTGAACTTCTAAATCTGTTAGCGTAAAATCTA
AGCTTTGTTGTATTTAAGTTCTTGGTACGAATCGTTACATTTCTCTCCAG
TGGTGTTTGCTTTCGTTTTCTTTGAAGCCACATTTTGTAAGGTTTTACCT
TTACCTGGCCTAATCTCACTAGACACTCGGTTTAAATGATCAGAGTTTGG
CTTGGTCTATGTTTAATCTACACATTGTATAAAATTTTAAGCATGATATA
AATTTTCCCctatttttagttttataaaCAAACCCTTTCGTTTCTGAAAT
GCAGAGAGTTACATTTTAGTCCTATCTGCACTtcatttattttgtttgta
atatTTTTGCGTCATATCAATATTTGCGTCCATTATTACACGCATGAGTG
ACggttttattttttagtaaATATGATCCTGTACTGCCTATACTACTCTT
ACCTTTATTCTTTAttatcttataaaataaaaaaaaccgcaCTGTTGTTG
CAAAATTAAT

Run BLAST on NCBI

protein sequence of beta-catenin

>TCONS_00006214-protein ID=TCONS_00006214-protein|Name=beta-catenin|organism=Clytia hemisphaerica|type=polypeptide|length=221bp
XLLTQGDPQTVQQAAQTVNQLTKKEASCHAVMNNNVMVTALIRVATTSQD
ADTVKSTVGAMHNMSHHKQGLSGIFKSGGIPALVRLLGYRIEAVVFYTIT
TLHNLLLHQEGAKMAVRLAGGLQKMIQLLHKTNVKFLAIVTDCLQILAYG
NQESKLIILASGGPAELVRIIRTYNYEKLLYTTCRVLKVLSVCSSNKPAI
VEVCYHSILVAVFFRKCQNAL

Run BLAST on NCBI

transcript from alignment at sc0000066:6017..9998+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00006214 ID=TCONS_00006214|Name=TCONS_00006214|organism=Clytia hemisphaerica|type=transcript|length=3982bp|location=Sequence derived from alignment at sc0000066:6017..9998+ (Clytia hemisphaerica)
TTANACTGTTGACTCAAGGTGACCCACAAACTGTCCAACAAGCTGCTCAA
ACTGTCAACCAACTTACCAAGAAGGAAGCCAGTTGCCATGCTGTTATGAA
CAACAATGTGATGGTAACCGCTTTGATTCGTGTCGCAACAACATCCCAAG
ATGCAGATACTGTCAAGTCAACTGTTGGTGCTATGCATAATATGTCCCAT
CATAAGTatgttcttttaattatttttaattgagGTAAAAGTTAAACTAC
AAACCCATCTTTAGTAGGAATCTAAGCAAAAGTAACTACTAAAGATGTCG
TAACTCAAACTTGTATGTACATAAAATAAGTATACTGAGAATAATTGATT
GTACATATGAGCATTTTCTTtaaatgaaaatgatgaaaattatgGTTACT
TTTCAGGCAAGGTTTATCTGGAATCTTTAAGAGTGGAGGTATTCCAGCTT
TGGTACGTCTTTTGGGATACNGCTGGTATCCTATCCAACTTGACTTGCAA
CAATCCACGAAACAAGGTTCGTTTGCTTTCAATTTAACTTGAGCCAAAAG
GTATCTTTGTATGTTTCCTAATTATTGATACTAGAGATTTGgtcctaaaa
aaaaacaaaaaatgatgcGATATTGCTCTTTGAAATAANTATCTGGAATC
TTTAAGAGTGGAGGTATTCCAGCTTTGGTACGTCTTTTGGGATATCGCAT
TGAAGCTGTTGTTTTCTACACCATCACAACACTTCACAATTTGCTTCTTC
ATCAAGAAGGTGCTAAGATGGCTGTTCGTCTTGCTGGTGGTTTACAAAAG
ATGATCCAACTCTTACATAAAACCAATGTCAAGTTCTTGGCTATTGTTAC
AGGTAAATAACTAATTATCTGTCTGTGTCTTTAGTATAAATCCTTCCTCT
TGTCTTCTTTTTGCTCAAATCTCATGTGTTAAATAAGTTGGTAATAAACA
ATTCATGTATTTACATTGTATTCTTTCATTagattgtttacaaattttgg
cttATGGAAACCAAGAATCGAAATTGATCATTCTTGCATCTGGTGGACCA
GCAGAGCTTGTCCGTATCATTCGAACATACAACTACGAGAAATTGTTGTA
CACCACTTGCCGTGTCTTGAAAGTATTGTCTGTTTGCTCGAGCAATAAAC
CAGCTATTGTTGAGGTATGCTATCATTCAATTCTTGTTGCTGTTTTTTTC
AGGAAATGCCAAAATGCTCTTTAAAAGCGCAGTGCTCCTTCTAAGAAATA
GACAATTTAAAAACCGGATGTAGTAGNCCGATTCGTGATCAAGGAGGATT
ACCACGTCTTGTTCAACTTCTCATGAAAGCTAACACAGGTTAGTGCCTTG
tatatcatttttttctgagcTGTTCTGAGTATACTCGTGTAACCTTTATT
ATAAAGAGGGGAAAATGCTCAATGGCTTGTGATATGGCAAGTTTCTGTTT
GAGGGTAAATCAACCGAAAGTAAGCTTAAAATGGTGGTCTAGTAGTTCTT
TAGATAAGTTCTTTTCCATAAAAATAGAACTTTGCTTGTTATCAAAGATG
AGGAAAATTGGAAGTTGGCTAGTAtttgaaaactttgtttttctttccac
TACTTGTAGACATTCAACGACGAGGTCCGGGAGCGCAAAGCATGCAAGAC
GGTGTACGCATGGAAGAAATCATGGAAGGAACTGTTGGCGCTTTACACAT
TTTGGCTCGTGAATCACTCAATCGTACCATCATCCGAGATCTGAACTGCA
TCCCTTCTTTTGTCCAGGTATTATAAAATATTtggatttaatttttattt
cggCTGAACTTTAGACCAAGCGTTGATCGATGAAAATGATGAATAAATAG
AATGTACATCAGGCACAATTTCATGGAGACTAAAACCaagttattttcaa
ttttcaaaaatgttgactACAATATCTAAATGCAAGGTAACGTTTTGTAA
CTTTCGCCTGatttaattttctctttttatctTCTAGTTGTTATACTCAG
ACATTGAGAATGTTGTTCGAGTAGCCGCTGGAGTTTTGTGCGAATTGGCA
CAAGATAAAGAAGGGGCGGACGCGATCGAGCGTGAGAACTCTACAACCAT
CTTGACGGAGCTCCTCCATTCGCGTAACGAAGGTATTGCTGCGTACGCGG
CCGCTGTACTCTTCCGAATGTCCGAAGATAAGTCACAAGATTACAAGAAA
CGTCTGTCCGTCGAATTGACCTCCTCACTATTCCGCGATGATATGCCATG
GGAGGTAGGTTTCCTGTCTATTTCTTATTTAACTTTAATATGATTTATTG
TTGTTTTATATAGTAACTTTTAATTCGTAGAATTTCCTCCCCTTATCCGC
ATTTACCATGACGACTCGCCTTATGATTAACCTTCAttgcttaatttttt
ttgtttattttcattatGAATTGCATCATTCAGCAGATAATTGCTTTTTA
ATAATTACTCTCCGAATCATTGTCTTTTTCGATCGTCCGTGGAGATAAAT
TCTCATTTTTTGTGGAAAATCCTTTATATATTATACCGCCTTTGGGGTAG
AAAAACCCTCGGATTATTTAAGATAATCTCTTGAAATGGACGGGTTTTAT
CATAAATACTAAAGTAAAACTGCAATGGAAATACAGCTGAAACTTCTTGG
GCTCGGGACTTTAGAGATTCTGTAAAGAAATTGCTAAATAAAATTNAAAA
CTGCAATGGAAATACAGCTGAAACTTCTTGGGCTCGGGACTTTAGAGATT
CTGTAAAGAAATTGCTAAATTCCTTTTAGCCTGGAAATACGGAAATGGCT
GACTTGATGACAAGCCAATCTTACCAAGACGAACTTTACAACCCACATTT
GACAACGCAACAAAGTCAAAACACTTCGATGCAATACACTAACTCCTTTC
AACACCAAATGTTTAATCAACAAAACACGCCCCAACCACAGGGCGGTCAA
CACCCTTGGTTTGAAGAAATGTGATAGTGCTCCGTGTTGTTTCGCAATAA
CTATATAACACTATTTCTGTTGGCAAAGGAATCATTATTTTTGGTGCTAA
TTACGATTGACTTGAATTTACAAAGCGGAAGCCAGATGATTTCCAATGCT
TGTTTGTATTATAGTTGTGTCTCATTTATGAACACTTTATATGTATAATA
TCCCCAAGAATGGCCCCACCCTTTacatttaaagttaaaaaggcACAATA
TTGATATATTCACCACTTACACCTGTGAGCAGACCAATTCTAATCTTTTC
TTGCACGGTAGTCGCTTGGTGAGCTCAAATAAAGGAATATTGAGAAGGCC
gttttgatatttatttttgtaacACAGTACACGTTATATTACAGTTTCTT
CTGCAAAATATAtcccaaatttttagttttatgtgcgtgtctagttttta
agatattttatggattttaacttttttttaaagtaagctttttgtctttt
atttttcttatactttttttattccTCAAAAATAGACCAATTGAACTTCT
AAATCTGTTAGCGTAAAATCTAAGCTTTGTTGTATTTAAGTTCTTGGTAC
GAATCGTTACATTTCTCTCCAGTGGTGTTTGCTTTCGTTTTCTTTGAAGC
CACATTTTGTAAGGTTTTACCTTTACCTGGCCTAATCTCACTAGACACTC
GGTTTAAATGATCAGAGTTTGGCTTGGTCTATGTTTAATCTACACATTGT
ATAAAATTTTAAGCATGATATAAATTTTCCCctatttttagttttataaa
CAAACCCTTTCGTTTCTGAAATGCAGAGAGTTACATTTTAGTCCTATCTG
CACTtcatttattttgtttgtaatatTTTTGCGTCATATCAATATTTGCG
TCCATTATTACACGCATGAGTGACggttttattttttagtaaATATGATC
CTGTACTGCCTATACTACTCTTACCTTTATTCTTTAttatcttataaaat
aaaaaaaaccgcaCTGTTGTTGCAAAATTAAT

Coding sequence (CDS) from alignment at sc0000066:6017..9998+

>TCONS_00006214 ID=TCONS_00006214|Name=TCONS_00006214|organism=Clytia hemisphaerica|type=CDS|length=2664bp|location=Sequence derived from alignment at sc0000066:6017..9998+ (Clytia hemisphaerica)
ANACTGTTGACTCAAGGTGACCCACAAACTGTCCAACAAGCTGCTCAAAC
TGTCAACCAACTTACCAAGAAGGAAGCCAGTTGCCATGCTGTTATGAACA
ACAATGTGATGGTAACCGCTTTGATTCGTGTCGCAACAACATCCCAAGAT
GCAGATACTGTCAAGTCAACTGTTGGTGCTATGCATAATATGTCCCATCA
TAAGCAAGGTTTATCTGGAATCTTTAAGAGTGGAGGTATTCCAGCTTTGG
TACGTCTTTTGGGATATCGCATTGAAGCTGTTGTTTTCTACACCATCACA
ACACTTCACAATTTGCTTCTTCATCAAGAAGGTGCTAAGATGGCTGTTCG
TCTTGCTGGTGGTTTACAAAAGATGATCCAACTCTTACATAAAACCAATG
TCAAGTTCTTGGCTATTGTTACAGattgtttacaaattttggcttATGGA
AACCAAGAATCGAAATTGATCATTCTTGCATCTGGTGGACCAGCAGAGCT
TGTCCGTATCATTCGAACATACAACTACGAGAAATTGTTGTACACCACTT
GCCGTGTCTTGAAAGTATTGTCTGTTTGCTCGAGCAATAAACCAGCTATT
GTTGAGGTATGCTATCATTCAATTCTTGTTGCTGTTTTTTTCAGGAAATG
CCAAAATGCTCTTTAAANACTGTTGACTCAAGGTGACCCACAAACTGTCC
AACAAGCTGCTCAAACTGTCAACCAACTTACCAAGAAGGAAGCCAGTTGC
CATGCTGTTATGAACAACAATGTGATGGTAACCGCTTTGATTCGTGTCGC
AACAACATCCCAAGATGCAGATACTGTCAAGTCAACTGTTGGTGCTATGC
ATAATATGTCCCATCATAAGCAAGGTTTATCTGGAATCTTTAAGAGTGGA
GGTATTCCAGCTTTGGTACGTCTTTTGGGATATCGCATTGAAGCTGTTGT
TTTCTACACCATCACAACACTTCACAATTTGCTTCTTCATCAAGAAGGTG
CTAAGATGGCTGTTCGTCTTGCTGGTGGTTTACAAAAGATGATCCAACTC
TTACATAAAACCAATGTCAAGTTCTTGGCTATTGTTACAGattgtttaca
aattttggcttATGGAAACCAAGAATCGAAATTGATCATTCTTGCATCTG
GTGGACCAGCAGAGCTTGTCCGTATCATTCGAACATACAACTACGAGAAA
TTGTTGTACACCACTTGCCGTGTCTTGAAAGTATTGTCTGTTTGCTCGAG
CAATAAACCAGCTATTGTTGAGGTATGCTATCATTCAATTCTTGTTGCTG
TTTTTTTCAGGAAATGCCAAAATGCTCTTTAAANACTGTTGACTCAAGGT
GACCCACAAACTGTCCAACAAGCTGCTCAAACTGTCAACCAACTTACCAA
GAAGGAAGCCAGTTGCCATGCTGTTATGAACAACAATGTGATGGTAACCG
CTTTGATTCGTGTCGCAACAACATCCCAAGATGCAGATACTGTCAAGTCA
ACTGTTGGTGCTATGCATAATATGTCCCATCATAAGCAAGGTTTATCTGG
AATCTTTAAGAGTGGAGGTATTCCAGCTTTGGTACGTCTTTTGGGATATC
GCATTGAAGCTGTTGTTTTCTACACCATCACAACACTTCACAATTTGCTT
CTTCATCAAGAAGGTGCTAAGATGGCTGTTCGTCTTGCTGGTGGTTTACA
AAAGATGATCCAACTCTTACATAAAACCAATGTCAAGTTCTTGGCTATTG
TTACAGattgtttacaaattttggcttATGGAAACCAAGAATCGAAATTG
ATCATTCTTGCATCTGGTGGACCAGCAGAGCTTGTCCGTATCATTCGAAC
ATACAACTACGAGAAATTGTTGTACACCACTTGCCGTGTCTTGAAAGTAT
TGTCTGTTTGCTCGAGCAATAAACCAGCTATTGTTGAGGTATGCTATCAT
TCAATTCTTGTTGCTGTTTTTTTCAGGAAATGCCAAAATGCTCTTTAAAN
ACTGTTGACTCAAGGTGACCCACAAACTGTCCAACAAGCTGCTCAAACTG
TCAACCAACTTACCAAGAAGGAAGCCAGTTGCCATGCTGTTATGAACAAC
AATGTGATGGTAACCGCTTTGATTCGTGTCGCAACAACATCCCAAGATGC
AGATACTGTCAAGTCAACTGTTGGTGCTATGCATAATATGTCCCATCATA
AGCAAGGTTTATCTGGAATCTTTAAGAGTGGAGGTATTCCAGCTTTGGTA
CGTCTTTTGGGATATCGCATTGAAGCTGTTGTTTTCTACACCATCACAAC
ACTTCACAATTTGCTTCTTCATCAAGAAGGTGCTAAGATGGCTGTTCGTC
TTGCTGGTGGTTTACAAAAGATGATCCAACTCTTACATAAAACCAATGTC
AAGTTCTTGGCTATTGTTACAGattgtttacaaattttggcttATGGAAA
CCAAGAATCGAAATTGATCATTCTTGCATCTGGTGGACCAGCAGAGCTTG
TCCGTATCATTCGAACATACAACTACGAGAAATTGTTGTACACCACTTGC
CGTGTCTTGAAAGTATTGTCTGTTTGCTCGAGCAATAAACCAGCTATTGT
TGAGGTATGCTATCATTCAATTCTTGTTGCTGTTTTTTTCAGGAAATGCC
AAAATGCTCTTTAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_003560	XLOC_003560	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
beta-catenin	TCONS_00006214-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000066	supercontig	sc0000066:6017..9998 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.78669	5.863	7.92079	9.01699	459.526	336.413	342.91	360.626	193.315	262.03	155.223	191.31	223.076	221.992	140.094	148.25	192.614	220.641	181.543	226.98	165.556	170.513	67.7722	87.7594	101.206	108.287	266.641	269.636	129.296	140.373

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR013284	Beta-catenin
IPR000225	Armadillo
IPR011989	ARM-like
IPR016024	ARM-type_fold

Vocabulary: **Biological Process**
Term	Definition
GO:0034333	adherens junction assembly

Vocabulary: **Molecular Function**
Term	Definition
GO:0004871	signal transducer activity
GO:0005515	protein binding
GO:0005488	binding

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034333	adherens junction assembly
molecular_function	GO:0005488	binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004871	signal transducer activity

Blast

[Close]

BLAST of TCONS_00006214 vs. Swiss-Prot (Human)
Match: CTNB1 (Catenin beta-1 OS=Homo sapiens GN=CTNNB1 PE=1 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 2.912e-82
Identity = 134/184 (72.83%), Postives = 158/184 (85.87%), Query Frame = 3

Query:   57 NQLTKKEASCHAVMNNNVMVTALIRVATTSQDADTVKSTVGAMHNMSHHKQGLSGIFKSGGIPALVRLLGYRIEAVVFYTITTLHNLLLHQEGAKMAVRLAGGLQKMIQLLHKTNVKFLAIVTDCLQILAYGNQESKLIILASGGPAELVRIIRTYNYEKLLYTTCRVLKVLSVCSSNKPAIVE 608
            +QL+KKEAS HA+M +  MV+A++R    + D +T + T G +HN+SHH++GL  IFKSGGIPALV++LG  +++V+FY ITTLHNLLLHQEGAKMAVRLAGGLQKM+ LL+KTNVKFLAI TDCLQILAYGNQESKLIILASGGP  LV I+RTY YEKLL+TT RVLKVLSVCSSNKPAIVE
Sbjct:  176 HQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVE 359

HSP 2 Score: 216.083 bits (549), Expect = 3.395e-59
Identity = 122/175 (69.71%), Postives = 137/175 (78.29%), Query Frame = 2

Query:  722 PIRDQGGLPRLVQLLMKANTDIQRR---GPGAQSMQDGVRMEEIMEGTVGALHILARESLNRTIIRDLNCIPSFVQLLYSDIENVVRVAAGVLCELAQDKEGADAIERENSTTILTELLHSRNEGIAAYAAAVLFRMSEDKSQDYKKRLSVELTSSLFR-DDMPWEPGNTEMADL 1234
            P+R+QG +PRLVQLL++A+ D QRR   G   Q   +GVRMEEI+EG  GALHILAR+  NR +IR LN IP FVQLLYS IEN+ RVAAGVLCELAQDKE A+AIE E +T  LTELLHSRNEG+A YAAAVLFRMSEDK QDYKKRLSVELTSSLFR + M W     E ADL
Sbjct:  526 PLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMSEDKPQDYKKRLSVELTSSLFRTEPMAW----NETADL 696

The following BLAST results are available for this feature:

BLAST of TCONS_00006214 vs. Swiss-Prot (Human)

BLAST of TCONS_00006214 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CTNB1	2.912e-82	72.83	Catenin beta-1 OS=Homo sapiens GN=CTNNB1 PE=1 SV=1	[more]

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TCONS_00006214 (transcript) - C. hemisphaerica