TCONS_00046270-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046270-protein
Unique NameTCONS_00046270-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length140

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046270-protein ID=TCONS_00046270-protein|Name=TCONS_00046270-protein|organism=Clytia hemisphaerica|type=polypeptide|length=140bp
MNIKVPIYFSTGLTEKANHYYKLFISWTNQKIRNTFVQRNLFDFKHIKAF
DRSYIENPGPMVVFATPGMLHAGLSLQIFKKWAPDENNMLIMPGYCVVGT
VGHKVLTGQKKIELDKKTVIDVNISVEYLSFSAHADASGN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029548XLOC_029548Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046270TCONS_00046270Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022712Beta_Casp
IPR001279Metallo-B-lactamas
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022712Beta-Casp domainSMARTSM01027Beta_Casp_2coord: 3..105
e-value: 2.1E-25
score: 100.4
IPR022712Beta-Casp domainPFAMPF10996Beta-Caspcoord: 3..104
e-value: 9.1E-22
score: 77.2
IPR001279Metallo-beta-lactamaseSUPERFAMILY56281Metallo-hydrolase/oxidoreductasecoord: 4..139

Blast
[Close]
BLAST of TCONS_00046270-protein vs. Swiss-Prot (Human)
Match: INT11 (Integrator complex subunit 11 OS=Homo sapiens GN=INTS11 PE=1 SV=2)

HSP 1 Score: 244.973 bits (624), Expect = 2.177e-79
Identity = 107/139 (76.98%), Postives = 127/139 (91.37%), Query Frame = 0 
Query:    1 MNIKVPIYFSTGLTEKANHYYKLFISWTNQKIRNTFVQRNLFDFKHIKAFDRSYIENPGPMVVFATPGMLHAGLSLQIFKKWAPDENNMLIMPGYCVVGTVGHKVLTGQKKIELDKKTVIDVNISVEYLSFSAHADASG 139
            MN+KVPIYFSTGLTEKANHYYKLFI WTNQKIR TFVQRN+F+FKHIKAFDR++ +NPGPMVVFATPGMLHAG SLQIF+KWA +E NM+IMPGYCV GTVGHK+L+GQ+K+E++ + V++V + VEY+SFSAHADA G
Sbjct:  259 MNLKVPIYFSTGLTEKANHYYKLFIPWTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQVLEVKMQVEYMSFSAHADAKG 397
The following BLAST results are available for this feature:
BLAST of TCONS_00046270-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
INT112.177e-7976.98Integrator complex subunit 11 OS=Homo sapiens GN=I... [more]
back to top