TCONS_00046419-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046419-protein
Unique NameTCONS_00046419-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length652

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046419-protein ID=TCONS_00046419-protein|Name=TCONS_00046419-protein|organism=Clytia hemisphaerica|type=polypeptide|length=652bp
LSNDRTAAEPQTAINAKPSTPSKHPLSNDQTAAEPQTAINAEPSTPSKHQ
LPNDHTAFSQDTNSNPDFVKLYDICRTYRPPKFVLVGDNLEYKVVRRHMT
TSKQNIDYHMFNMMGVRNRVNAPVELEDMIQPPLENKLDIDLSNYFPNKN
DESKLATEFSTLVFRVLTEYREDMSRMRNHLRSVIPHDYMEETKRKSEIT
TLGILNKNENKTEDMIEIMEDLHTMVPCLEDGELVKTFAIGDLLTLEREI
HSQEDLRCSTTAIKRLEGLIPGLADFHTYGNFMEVVWHFLYDASSSSDVG
TLYQARNFLNARNVSKEPMKCVNACEELLNKYTEALTLAAFHEYIETNKI
DLSKLKEPTAQNKESLKNVISKFVESYVIAETPDIAASAISYDCQFCTKS
YKRKAGLVNHLKKQHPGNEQDESEKSGDDCIVNYSKNALMLGYLVKNFAD
ARRYGDGERIIRLYKFLMVLFKIDHRSKYGFYSLQLLAQINNLLPPALAF
ELKWNRTVNNTGRYDGNVELDRELEHRNKYAKEELKHFQGKLTEQSIKRV
SQSYDKVREIVDKFDIEANVSKQSGKHTVPDWKADVLELSEQFKSSKLFT
VDPNGRSHKRFPGFPKNVFNGIDATTCKNWALDSVMDEFNSLNIYKHPFY
KV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029625XLOC_029625Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046419TCONS_00046419Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 392..415
e-value: 0.0089
score: 25.2
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 394..415
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 392..420
score: 11.219
NoneNo IPR availableGENE3D3.30.160.60coord: 228..431
e-value: 6.6E-5
score: 22.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..63

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046419-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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