TCONS_00046461-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046461-protein
Unique NameTCONS_00046461-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length549

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046461-protein ID=TCONS_00046461-protein|Name=TCONS_00046461-protein|organism=Clytia hemisphaerica|type=polypeptide|length=549bp
MFFWLIIFCCSLNFSYQETYLPSCEIRYDIRHYFNHTCEEVYELQPVCNR
TLQVAYSNFPPYAFKDKDGTIQGFIPGYFKKVFIDTCCLGCGKINYLPQK
THKKKIDDQFIGEEADIVVPVQNYINGEYYLGMRYANILELDEIEYIGVL
DPPDPGRKKTILFKSIFETWPLVLMCISMSIGAGSLVWVLENRSNMKQFP
RTWQGLFEGIWFTFVSMTAVGYGDTIPQCWPARVFSAVWIFIGVTFFGMY
LGTITSVMTTNLQTKIEFKTTGQPVGVLSWTNAPHQNVIQEHGIPKPYDT
IEELIDAFKMNKIHAIALDKWMSEYYLPEIKKANPKAKIHKHSVPLDSGI
GFITPDENIFKMKKFFHEQNVDNMIRLWYDVALQFNLGNSNTTTMTSWEA
EQLNAAVKDEEIDVLFTTEHISFPICLILMLVLTICCIATNIYLNKRQNE
SCMNFNNPGSNEMLEMEEPNRLEANYRAMMKNLQKCVKGSSSRSQQFDGI
QENSNTNTGEGSQRMSMIGNYKAREGAPGKLGRHEYRDSLGNPESFYSV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029649XLOC_029649Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046461TCONS_00046461Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013099K_chnl_dom
IPR001320Iontro_rcpt
Vocabulary: Molecular Function
TermDefinition
GO:0004970ionotropic glutamate receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
molecular_function GO:0004970 ionotropic glutamate receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.287.70coord: 157..349
e-value: 4.1E-23
score: 81.0
NoneNo IPR availableGENE3D3.40.190.10coord: 48..119
e-value: 8.2E-4
score: 18.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 493..549
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 161..264
NoneNo IPR availableSUPERFAMILY53850Periplasmic binding protein-like IIcoord: 269..340
coord: 50..145
IPR013099Potassium channel domainPFAMPF07885Ion_trans_2coord: 176..259
e-value: 1.5E-12
score: 47.2
IPR001320Ionotropic glutamate receptorPFAMPF00060Lig_chancoord: 169..264
e-value: 4.3E-6
score: 26.5

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046461-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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