TCONS_00046513-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046513-protein
Unique NameTCONS_00046513-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length438

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046513-protein ID=TCONS_00046513-protein|Name=TCONS_00046513-protein|organism=Clytia hemisphaerica|type=polypeptide|length=438bp
MIGEKQRSTSTSMKNLSRKFSNSAITVCNNVMERSRVSNFKRTFSLRNIF
HHQSTHGHSKSSTRNNSSSNHGFTFKRTPSRKLDIYFPFIRGPDVKPPRN
ERRTLKLQKTEDEGFGFWLQTYAFPKNGGEAQKRTFVRYVEDEGAAYMAG
LREGDIIVEVGEQNVEQMDHIKIVQLITEEKTELRLVVKFIDAVRRVELA
VRLKKKQTKLKTKEEELIRIKQQEYDLLNGIITYEPCGSPKSEDGDEISL
HTSTESEISSISSTQSDELTVRTSKFNKRSSRVLDSIKELNCNDNVSGYS
ISDWNNVSKTTDDELLSLYCDKMDYHNSLPRGCPKNLKRGDSMPAHKYRS
LPRKRIVDTSSESISNYTREYALDYSNEQFDSFDFDDGESSDDCSSSRSS
IGGTVFQNLDRAPRRNRPKSYKMAMHSLKHLEGDVAEL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029690XLOC_029690Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046513TCONS_00046513Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 196..223
NoneNo IPR availableGENE3D2.30.42.10coord: 94..193
e-value: 5.8E-18
score: 64.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 241..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 386..418
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..76
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 103..189
e-value: 4.84158E-16
score: 71.829
IPR001478PDZ domainSMARTSM00228pdz_newcoord: 113..192
e-value: 1.3E-9
score: 48.0
IPR001478PDZ domainPFAMPF00595PDZcoord: 105..188
e-value: 7.6E-12
score: 45.3
IPR001478PDZ domainPROSITEPS50106PDZcoord: 104..192
score: 11.642
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 84..189

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046513-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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