TCONS_00046538-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046538-protein
Unique NameTCONS_00046538-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length203

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046538-protein ID=TCONS_00046538-protein|Name=TCONS_00046538-protein|organism=Clytia hemisphaerica|type=polypeptide|length=203bp
MGKRDTRVAFVNPVAASRSSGPAQGGPSIKDYLSRPRPSWDELKEQIKAT
RKGSRTLEQFEKERNMDYRAELDRGREKFFNSEKKKKRKKKRTRSSSSSS
STRSSSTSSTNSSINNRRHKKSKKKKKKHHNKSKRKEQKYEKSESESSSG
EDRVEQENHGHLNRDESRNNSDTERHGEKKRKKRKRKKLSIEKLTNETYS
LQC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029702XLOC_029702Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046538TCONS_00046538Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 126..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..203

Blast
[Close]
BLAST of TCONS_00046538-protein vs. Swiss-Prot (Human)
Match: F133B (Protein FAM133B OS=Homo sapiens GN=FAM133B PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 6.212e-27
Identity = 43/83 (51.81%), Postives = 66/83 (79.52%), Query Frame = 0 
Query:    1 MGKRDTRVAFVNPVAASRSSGPAQG-GPSIKDYLSRPRPSWDELKEQIKATRKGSRTLEQFEKERNMDYRAELDRGREKFFNS 82
            MGKRD RVA++NP+A +RS GP Q  GP+I+DYL+RPRP+W+E+KEQ++  +KGS+ L +FE++ N +++ EL++ REK  + 
Sbjct:    1 MGKRDNRVAYMNPIAMARSRGPIQSSGPTIQDYLNRPRPTWEEVKEQLEKKKKGSKALAEFEEKMNENWKKELEKHREKLLSG 83
The following BLAST results are available for this feature:
BLAST of TCONS_00046538-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
F133B6.212e-2751.81Protein FAM133B OS=Homo sapiens GN=FAM133B PE=1 SV... [more]
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