TCONS_00046722-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046722-protein
Unique NameTCONS_00046722-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length182

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046722-protein ID=TCONS_00046722-protein|Name=TCONS_00046722-protein|organism=Clytia hemisphaerica|type=polypeptide|length=182bp
RTVDLSPLNKHCQRETFPTASPFQAARRVPPNTWKTVNDAWNGFHSVPLR
ESDKHLTTFITPYGRWRYRATPQGFSGSGDGYNRRFDQILSDFVRKERVT
DDVLHHDASLREHWWRTFEMPTTSGRAGITMNPDKFQFAQRTVDFAGFRI
TDTSIEPLPKYTDAIRNFPTPKSITDIRSWFG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029808XLOC_029808Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046722TCONS_00046722Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.270coord: 150..182
e-value: 3.7E-5
score: 23.5
NoneNo IPR availableGENE3D3.10.10.10coord: 1..67
e-value: 5.2E-10
score: 38.9
NoneNo IPR availableGENE3D3.30.70.270coord: 68..149
e-value: 1.4E-11
score: 43.8
NoneNo IPR availableCDDcd01647RT_LTRcoord: 3..150
e-value: 3.33929E-25
score: 95.7401
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 3..182
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 25..150
e-value: 4.4E-7
score: 29.5
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..150
score: 8.712

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046722-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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