TCONS_00046769-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00046769-protein
Unique Name	TCONS_00046769-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	614

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00046769-protein ID=TCONS_00046769-protein|Name=TCONS_00046769-protein|organism=Clytia hemisphaerica|type=polypeptide|length=614bp
MEEDSDYGSETPSALNSTSQPKSNSLGSTPSNGSGRRGGSRSRKKRYSHL
QKKRKSRYRPFVNIEAGNKICVEVCRTRTVANVEWQDGTFTSNVASTDLF
PSENLDELEFFPGDYVIDKRVDAEAKEVTKYGVVQTADFTGRICNVRWLY
YTNDPTAVTVEEKIEEDVSVYDITYHPDFSFRPGDIVVRLSPTDKFAIYQ
GAKDESGNANRLSSVGQVIQVNSDGRVDVVWIDKRRSSIIPSELYSINQD
DWDGSEHDYDDDGEFDDDVIMGDLDEFPEDDDGEWETSSETSDTGAELRN
QLSPLEDVIQRSLNALIPNTATDVVVGAPEETTQLPIETSNETPLSEDHV
IGMNRRTVEFMNALDRHFFAPVNQQAQNEQISAPQRQSIDDEPTDMSPDE
ATKSCFQTLEQADQSHQFYSTTCLPINPRKYNAAIMKDMRLMRSHLPPGI
IVKSFQDRIDLLSILITGPVGTPYEDGLFVFDLQYPDNYPIDPPNVHYHA
FCTDRLNPNLYQEGKVCVSLLGTWTGKGNETWTSKSTVHQLLLSIQGLIL
NAEPYFNEAGYEKQRGTVEGKENSRVYNEMALIKMIESLRNMLQRPPKVF
QDEIQQHFQEKLPR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_029847	XLOC_029847	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00046769	TCONS_00046769	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000608	UBQ-conjugat_E2
IPR016135	UBQ-conjugating_enzyme/RWD

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 433..590 e-value: 1.4E-23 score: 94.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 375..400
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 275..297
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..55
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 435..581 e-value: 7.5E-28 score: 96.8
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBIQUITIN_CONJUGAT_2	coord: 433..554 score: 21.863
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 435..583 e-value: 3.70138E-34 score: 125.778
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10		coord: 369..613 e-value: 5.8E-45 score: 153.2
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 429..597

Blast

[Close]

BLAST of TCONS_00046769-protein vs. Swiss-Prot (Human)
Match: UBE2O ((E3-independent) E2 ubiquitin-conjugating enzyme OS=Homo sapiens GN=UBE2O PE=1 SV=3)

HSP 1 Score: 369.777 bits (948), Expect = 3.602e-114
Identity = 227/617 (36.79%), Postives = 334/617 (54.13%), Query Frame = 0

Query:   63 NIEAGNKICVEVCRTRTVANVEWQDGTFTSNVASTDLFPSENLDELEFFPGDYVIDKRVDAEAKEVTKYGVVQTADFTGRICNVRW--LYYTNDPTAVTVEEKIEEDVSVYDITYHPDFSFRPGDIVVRLSPTDKFAIYQGAKDESGNANRLSSVGQVIQVNSDGRVDVVWIDKRRSSIIPSELYSIN----QDDWD--------GSEHDYDDDG---EFDDDVIMGDLDEFPEDDDGEWETSSETSDTGAELRNQLS------------PLEDVIQRS------------------LNALIPNTATDVVVGAPEETTQLPIETSNETPLSEDHVIGMNRRTVEFMNALDRHFFAPVNQQAQNEQISAPQRQSIDDEPTDMSPDEA---------TKSC---------------FQTLEQADQSHQFYSTTCLPINPRKYNAAIMKDMRLMRSHLPPGIIVKSFQDRIDLLSILITGPVGTPYEDGLFVFDLQYPDNYPIDPPNVHYHAFCTDRLNPNLYQEGKVCVSLLGTWTGKGNETWTSKSTVHQLLLSIQGLILNAEPYFNEAGYEKQRGTVEGKENSRVYNEMALIKMIESLRNMLQRPPKVFQDEIQQHF 608
            + + G+++ VEV  T T A+V WQDG+   N+ S DLFP  +LD  EF PGD+V+DKRV +   +   YGVVQ+ D  GR C V+W  L  + D   +  EE   EDVSVYDI  HPDF FR  DIV+R+  T+  A ++  +DE        SVGQV +V+   +V+VVW D  ++ I+P  LY+I     + D+D         S  +++DD    E D+ ++  +  +  E      E      D G  +  + +            P+  +++++                  L +L   T   ++ G+P   T  P + + E    +D    + +        LD      + ++ + E +   +R+  +D+P   SP +A          + C               F  LE A  +H F      P   +K+ + + K+M L+ + LP GI+VK+F+DR+DL S LI GP  TPYEDGL++FD+Q P+ YP  PP+  Y + C+ RLNPNLY  GKVCVSLLGTW GKG E WTSKS++ Q+L+SIQGLIL  EPY+NEAG++  RG  EG ENSR YNEMALI++++S+  +++RPP+VF+ EI+QHF
Sbjct:  537 DFKPGDRVAVEVVTTMTSADVMWQDGSVECNIRSNDLFPVHHLDNNEFCPGDFVVDKRVQS-CPDPAVYGVVQSGDHIGRTCMVKWFKLRPSGDDVELIGEE---EDVSVYDIADHPDFRFRTTDIVIRIGNTEDGAPHK--EDEP-------SVGQVARVDVSSKVEVVWADNSKTIILPQHLYNIESEIEESDYDSVEGSTSGASSDEWEDDSDSWETDNGLVEDEHPKIEEPPIPPLEQPVAPEDKGVVISEEAATAAVQGAVAMAAPMAGLMEKAGKDGPPKSFRELKEAIKILESLKNMTVEQLLTGSPTSPTVEPEKPTREKKFLDD----IKKLQENLKKTLDN---VAIVEEEKMEAVPDVERK--EDKPEGQSPVKAEWPSETPVLCQQCGGKPGVTFTSAKGEVFSVLEFAPSNHSFKKIEFQPPEAKKFFSTVRKEMALLATSLPEGIMVKTFEDRMDLFSALIKGPTRTPYEDGLYLFDIQLPNIYPAVPPHFCYLSQCSGRLNPNLYDNGKVCVSLLGTWIGKGTERWTSKSSLLQVLISIQGLILVNEPYYNEAGFDSDRGLQEGYENSRCYNEMALIRVVQSMTQLVRRPPEVFEQEIRQHF 1131

The following BLAST results are available for this feature:

BLAST of TCONS_00046769-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00046769-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
UBE2O	3.602e-114	36.79	(E3-independent) E2 ubiquitin-conjugating enzyme O...	[more]

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TCONS_00046769-protein (polypeptide) - C. hemisphaerica