TCONS_00047143-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00047143-protein
Unique Name	TCONS_00047143-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	439

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00047143-protein ID=TCONS_00047143-protein|Name=TCONS_00047143-protein|organism=Clytia hemisphaerica|type=polypeptide|length=439bp
MVLEFLKRFFSYTIVPLLLISIMPNFVLVLWYIVSQCDGSFMQFYEKILT
VQPKEFLLAMWRPAFSWESKAHVFILGYSLWAGLLQVIVPGPRLEGPLTA
KGNTPVYKDNGFSCYVITMAAFGGLTYVMKTKYGMTPTVVFDHYGEVLAW
LSLYSLFICVLLYLKGRLAPSTSDNGSSGNFIFDYYWGTELYPRIFGIDI
KVFTNCRFGLTVWALVISICFLKSYELYGFVDSMFVCWLLQIIYLTKFFW
WEGGYMRTMDISVDRAGFYICWGCLVYVPGFYTLCSLYMVAHPVKLGIEL
TAFFIVAGAASIFINYQADYQRQVFRETGGKCLIWGRKPDMIWAKYRTEA
GQDKLNPLLLSGWWGVARHFHYLPELALSFFWSVPALFDHLLPFSYFIFL
TILLVHRTFRDDVKCQKKYGRYWQQYCKKVPYKIVPYIF

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_030053	XLOC_030053	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00047143	TCONS_00047143	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001171	Ergosterol_biosynth_ERG4_ERG24
IPR018083	Sterol_reductase_CS

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0016020	membrane
molecular_function	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001171	Ergosterol biosynthesis ERG4/ERG24	PFAM	PF01222	ERG4_ERG24	coord: 23..439 e-value: 3.0E-71 score: 240.3
IPR018083	Sterol reductase, conserved site	PROSITE	PS01018	STEROL_REDUCT_2	coord: 403..426
IPR018083	Sterol reductase, conserved site	PROSITE	PS01017	STEROL_REDUCT_1	coord: 179..194

Blast

[Close]

BLAST of TCONS_00047143-protein vs. Swiss-Prot (Human)
Match: DHCR7 (7-dehydrocholesterol reductase OS=Homo sapiens GN=DHCR7 PE=1 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 3.063e-68
Identity = 128/348 (36.78%), Postives = 199/348 (57.18%), Query Frame = 0

Query:   95 EGPLTAKGNTPVYKDNGFSCYVITMAAFGGLTYVMKTKYGMTPTVVFDHYGEVLAWLSLYSLFICVLLYLKGRLAPSTS-DNGSSGNFIFDYYWGTELYPRIFG-IDIKVFTNCRFGLTVWALVISICFLKSYELYGFV-DSMFVCWLLQIIYLTKFFWWEGGYMRTMDISVDRAGFYICWGCLVYVPGFYTLCSLYMVAHPVKLGIELTAFFIVAGAASIFINYQADYQRQVFRETGGKCLIWGRKPDMIWAKYRTEAGQDKLNPLLLSGWWGVARHFHYLPELALSFFWSVPALFDHLLPFSYFIFLTILLVHRTFRDDVKCQKKYGRYWQQYCKKVPYKIVPYIF 439
            EG +T  G    Y+ NG   +++T   +    +++      +PT++FD++  +L   ++    +     +KG   P+++ D   +GNF ++Y  G E  PRI    D K+F N R G+  W L+      K  EL+  V ++M +  +LQ IY+  FFW E  Y++T+DI  D  G+Y+ WG  V++P  YTL  LY+V HPV+L        ++ G    +I   A++Q+ +FR T G+CLIWGRKP +I   Y +  GQ   + LL+SG+WGVARHF+Y+ +L  S  + +     HLLP+ Y I++ ILL HR  RD+ +C  KYGR W++Y   VPY+++P IF
Sbjct:  131 EGAVTPAGVVNKYQINGLQAWLLTHLLWFANAHLLSW---FSPTIIFDNWIPLLWCANILGYAVSTFAMVKGYFFPTSARDCKFTGNFFYNYMMGIEFNPRIGKWFDFKLFFNGRPGIVAWTLINLSFAAKQRELHSHVTNAMVLVNVLQAIYVIDFFWNETWYLKTIDICHDHFGWYLGWGDCVWLPYLYTLQGLYLVYHPVQLSTPHAVGVLLLGLVGYYIFRVANHQKDLFRRTDGRCLIWGRKPKVIECSYTSADGQRHHSKLLVSGFWGVARHFNYVGDLMGSLAYCLACGGGHLLPYFYIIYMAILLTHRCLRDEHRCASKYGRDWERYTAAVPYRLLPGIF 475

The following BLAST results are available for this feature:

BLAST of TCONS_00047143-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00047143-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DHCR7	3.063e-68	36.78	7-dehydrocholesterol reductase OS=Homo sapiens GN=...	[more]

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TCONS_00047143-protein (polypeptide) - C. hemisphaerica