boule-like-1b (polypeptide) - C. hemisphaerica

Overview
Nameboule-like-1b
Unique NameTCONS_00047204-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length299

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047204-protein ID=TCONS_00047204-protein|Name=boule-like-1b|organism=Clytia hemisphaerica|type=polypeptide|length=299bp
MTGEHTSVIYGTPYPYRLFVGCLPLEATAEELGTFFSQYGNVVEAKVVLN
ENGVSKRFGFVTFTNKDDVTDLIKNRTVEFQKKWINVGPAVKKNLENQTS
VGVGGGDNPSKPRSATSVTVVTKKSPPTTTMAQQQQHGNTKQSFYRGPQH
IPKTVIRKSPTEQHFEPDFMRALTNANAYQQHNQHSEFCPRYHQKIDDSF
SSTWGISNKKTSYWSQPPKRQMQSNGSSRSSSVDAMETAFKAPLLPFEED
ASQSQFMPKIDFSSFDFSFDNNPWSRLGGCGPIAPPPGFPQHSNWIQKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030073XLOC_030073Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047204TCONS_00047204Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 17..88
e-value: 7.0E-18
score: 75.4
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 18..74
e-value: 2.5E-14
score: 52.7
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 16..98
score: 14.743
IPR000504RNA recognition motif domainSUPERFAMILY54928RNA-binding domain, RBDcoord: 15..109
NoneNo IPR availableGENE3D3.30.70.330coord: 12..195
e-value: 1.9E-17
score: 62.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 211..235

Blast
The following BLAST results are available for this feature:
BLAST of boule-like-1b vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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