TCONS_00047210-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00047210-protein
Unique Name	TCONS_00047210-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	749

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00047210-protein ID=TCONS_00047210-protein|Name=TCONS_00047210-protein|organism=Clytia hemisphaerica|type=polypeptide|length=749bp
MASVGNGSGMFNKTRPKIPEIGVDLNKPEQTFKFVMALCAIIFILAVAFF
TYVRTKFRQIYAPRLLLIENKMFGIGNLPKKSWFSWVTLSFKTKDEDIYV
FAGFDALVFIRFLRLMLKFALCTMPYGLIVLLPLNVVGGNKLDDGLNKLS
MSNIVHESKHLWAHWVAVWFYSLLVCYFCWSEWKVYIQYRQRYLKKGLHH
QFALLVQEIPDELNEDHSLYEFMDKLFPNKISSVHVVRDLDNWRSLVKKH
DKFLLNWENAKFYEESGKARRRIRKSCCGDKVDAITYYEKELELIQEDLF
TEKSKDGKEVLNCAFIVFKSIKTKELALKSVWRKESMTFSKYPAPQSSEI
KWRALKYPYTVRKMLELVGFITVFALVLFWAVPITFISTLTKLESLSKEF
KWLDSILAGSSKMFISFLQGVLPVILIAVFYLILPYILFFIATIQGLFSN
SRCAEMVFKCLFVFQTFNTFFIYILSGSVLQNLSQIVQEPFKIPSLLAKS
LPSQSGFYVNYLAITSFVGLAIELTRIWPLIRISVTLKWFAKTSRQKLEA
WKPKRAEYEVMYSQALLFFLIGLSFSVLSPIIVPFVVLYFAFAYVVWMYQ
LLHVYIPDYDHGGRFWTFVFNRMMVCVLVFQLLMVGVFLLKEVWFAAVFL
APLIIVTVAFWLYINETYLPYSRYLTVEETIGLKGAEQRFLEEVKNRYIL
DQTVPEVFELSTDKQPSSEDYIPIDSINNPDTDEENPQDMKESTRLLGI

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_030074	XLOC_030074	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00047210	TCONS_00047210	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR032880	Csc1_N
IPR003864	RSN1_7TM
IPR027815	PHM7_cyt

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032880	Calcium permeable stress-gated cation channel 1, N-terminal transmembrane domain	PFAM	PF13967	RSN1_TM	coord: 37..182 e-value: 8.7E-33 score: 113.2
IPR003864	Calcium-dependent channel, 7TM region, putative phosphate	PFAM	PF02714	RSN1_7TM	coord: 367..638 e-value: 5.7E-73 score: 245.5
IPR027815	10TM putative phosphate transporter, cytosolic domain	PFAM	PF14703	PHM7_cyt	coord: 201..353 e-value: 1.1E-21 score: 77.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 712..749

Blast

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BLAST of TCONS_00047210-protein vs. Swiss-Prot (Human)
Match: CSC1 (Calcium permeable stress-gated cation channel 1 OS=Homo sapiens GN=TMEM63C PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.629e-21
Identity = 127/573 (22.16%), Postives = 243/573 (42.41%), Query Frame = 0

Query:   81 KSWFSWVTLSFKTKDEDIYVFAGFDALVFIRFLRLMLKFALCTMPYGLIVLLPLNVVGGNKLD--DGLNKLSMSNIVHESKHLWAHWVAVWFYSLLVCYFCWSEWKVYIQYRQRYLKKGLHHQFALLVQEIPDELNEDHSLYEFMDKLFPNK-ISSVHVVRDLDNWRSLVKKHDKFLLNWENAKFY----EESGKARRRIRKSC---------CGDKVDAITYYEKELELIQEDLFTEKSKDGKEVLNCAFIVFKSIKTKELALKSVWRKESMTFSKYPAPQSSEIK-------WRALKYPY---------TVRKMLELVGFITV----FALVLFWAVPITFISTLTKLESLSKEFKWLDSILAGSSKMFISFLQGVLPVILIAVFYLILPYILFFIATIQGLFS-NSRCAEMVFKCLFVFQTFNTFFIYILSGSVLQNLSQIVQEPFKIPSLLAKS-------LPSQSGFYVNYLAITSFVGLAIELTRIWPLIRISVTLKWFAKTSRQKLEAWKPKRAEYEV--MYSQALLFFLIGLSFSVLSPIIVPFVVLYFAFAYVVWMYQLLHVYIP 607
            K + SW   S   KDED+    G DA ++I F   ++ F L      L ++LP+N   G+ LD      + ++ N+  ESK LW H +  +FY +    F       +     + + +       L++  +P ++ +   + +   + +P   ++ VH   D+   R+L+   D+         FY    +++GK   RI             C  +VDA  YY +  E + ++   E ++   + L+  F+ F+  +  +       RK+         PQ S +        WR    P+         +VR+      FI +    F L  F   P   ++T+  + ++++  + L +            +    P +++  F +ILP I++F A ++  ++ +S+   MV KC      F  F + IL    L +L   ++  F I  L   S       LP    F+VNY+   + +G  +EL R+  L   S  L +F+++  +++   K +  +++    Y+  +  F + +++S+  PIIVPF +LY    ++   Y + + + P
Sbjct:  104 KGFCSWFFNSITMKDEDLINKCGDDARIYIVFQYHLIIFVLIICIPSLGIILPINYT-GSVLDWSSHFARTTIVNVSTESKLLWLHSLLSFFYFITNFMFMAHHCLGFAPRNSQKVTR------TLMITYVPKDIEDPELIIKHFHEAYPGSVVTRVHFCYDV---RNLIDLDDQRRHAMRGRLFYTAKAKKTGKVMIRIHPCARLCFCKCWTCFKEVDAEQYYSELEEQLTDEFNAELNRVPLKRLDLIFVTFQDSRMAKRV-----RKDYKYVQCGVQPQQSSVTTIVKSYYWRVTMAPHPKDIIWKHLSVRRFFWWARFIAINTFLFFLFFFLTTPAIIMNTI-DMYNVTRPIEKLQN----------PIVTQFFPSVMLWGFTVILPLIVYFSAFLEAHWTRSSQNLVMVHKCYI----FLVFMVVILPSMGLTSLDVFLRWLFDIYYLEQASIRFQCVFLPDNGAFFVNYVITAALLGTGMELLRLGSLFCYSTRL-FFSRSEPERVNIRKNQAIDFQFGREYAWMMNVFSVVMAYSITCPIIVPFGLLYLCMKHLTDRYNMYYSFAP 645

The following BLAST results are available for this feature:

BLAST of TCONS_00047210-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00047210-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CSC1	8.629e-21	22.16	Calcium permeable stress-gated cation channel 1 OS...	[more]

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TCONS_00047210-protein (polypeptide) - C. hemisphaerica