TCONS_00047212-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047212-protein
Unique NameTCONS_00047212-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length632

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047212-protein ID=TCONS_00047212-protein|Name=TCONS_00047212-protein|organism=Clytia hemisphaerica|type=polypeptide|length=632bp
MDKLVYQQSDVFVHTAVPGSTFHDDIIRGTLTIYSDGEGTFVEWRPSTGF
TPVEYEVHPVFSGSIEYGVVTTQEPLSIASSSKETNQPPPVPYKITFNVE
QIHSIRRSDPKLAWSYVLFYMKDHRSQPALHFHNGGIQEMISCLQRYIWL
TRSSLNSRLFIVKERDDAMQSAVNQFELFTDKPVGAISKLFNNTFYDTLN
NFSKVTNYVLSGMGQLDLQERRPERSANGGNDDEFEFLHPDEPEIDLGTI
IPVARGDPLQPEEWCAFFNNDGAITHAHKLKERIFRGGVHEDIKCEAWKY
LLGFYKFDSTYEERGVRSKKLRDDYNRMKTQWESISVEQEKKFQEFSQRK
QLVEKDVTRTDRKLEYFAGDDNPNVKKLFNVLMTYCMYNFDLGYVQGMSD
LLAPILRLVEDEVETFWCFAGLMQMEERMFEISQDLMKTQLECLGKLIKF
LYPNFWAFLEKKEAQNLYFCFRWLLISFKREFVYKDVMTLWEALWTQEYS
MNFKLFICCAILEHEKDEMMKKNFDFNDILKHTNKLSCQMDVSFVLSRAE
SIVLQLKQADDLPDHIKDLITQSQDGDNTEDDTGSARQNGNVLNNRDKND
NDDVTALGGEGSVDGPLKEDVIELMVDTHSVF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030075XLOC_030075Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047212TCONS_00047212Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
IPR021935DUF3548
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000195Rab-GTPase-TBC domainSMARTSM00164tbc_4coord: 285..523
e-value: 5.3E-49
score: 178.8
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 293..519
e-value: 1.5E-44
score: 152.2
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 288..498
score: 33.346
IPR000195Rab-GTPase-TBC domainSUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 262..456
IPR000195Rab-GTPase-TBC domainSUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 434..554
IPR021935Domain of unknown function DUF3548PFAMPF12068DUF3548coord: 3..190
e-value: 1.1E-24
score: 87.1
NoneNo IPR availableGENE3D1.10.8.270coord: 306..424
e-value: 2.9E-30
score: 104.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 571..612

Blast
[Close]
BLAST of TCONS_00047212-protein vs. Swiss-Prot (Human)
Match: TBC15 (TBC1 domain family member 15 OS=Homo sapiens GN=TBC1D15 PE=1 SV=2)

HSP 1 Score: 394.43 bits (1012), Expect = 1.315e-128
Identity = 224/639 (35.05%), Postives = 349/639 (54.62%), Query Frame = 0 
Query:    3 KLVYQQSDVFVHTAVPGSTFHDDIIRGTLTIYSDGEGTFVEWRP--------------STGFTPVEYEVHPVFSG----------SIEYGVVTT----QEPLSIASSSKETNQPPPVPYKITFNVEQIHSIRRSDPKLAWSYVLFYMKDHRSQPALHFHNGGIQEMISCLQRYIWLTRSSLNSRLFIVKERDDAMQSAVNQFELFTDKPVGAI------------------SKLFNNTFYDTLNNFSKVTNYVLSGMGQLD--LQERRPERSANGGND--DEFEFLHPDEP------EIDLGTIIPVARGDPLQPEEWCAFFNNDGAITHAHKLKERIFRGGVHEDIKCEAWKYLLGFYKFDSTYEERGVRSKKLRDDYNRMKTQWESISVEQEKKFQEFSQRKQLVEKDVTRTDRKLEYFAGDDNPNVKKLFNVLMTYCMYNFDLGYVQGMSDLLAPILRLVEDEVETFWCFAGLMQMEERMFEISQDLMKTQLECLGKLIKFLYPNFWAFLEKKEAQNLYFCFRWLLISFKREFVYKDVMTLWEALWTQEYSMNFKLFICCAILEHEKDEMMKKNFDFNDILKHTNKLSCQMDVSFVLSRAESIVLQLKQADDLPDHIKDLI-TQSQDGDNTEDDTG 584
            K++Y+Q  V++H++   +   D +I G L +        V+WRP                  + VE+   P   G            E+ +V T    ++P +   +    N      +   F++  + SI+++   + WSY++F +KD    PALHFH G  + +I  L++Y+ L  S  + R  +V  ++ ++  +   FE   D+P   +                   K+  + +  T+  FSKVTNY+   +   D    +R P   A+  +D     +    +EP       IDLG    V R +P+  EEW    +++G I +   +K+ IFRGG+   ++ +AWK+LLG++ +DST EER    K+  D+Y RMK QW+SIS EQEK+       + L+EKDV RTDR  +++ G DNP +  L ++LMTYCMY+FDLGYVQGMSDLL+P+L ++E+EV+ FWCFA  M    + FE     MKTQL  L  L++ L   F ++LE +++  LYFCFRWLLI FKREF + D++ LWE +WT+    NF L +CCAILE EK ++M+K++ FN+ILKH N+LS ++DV  +L +AE+I LQ+ +  +LP  + +++  Q  +    + D G
Sbjct:   10 KIIYEQEGVYIHSSCGKTNDQDGLISGILRVLEKDAEVIVDWRPLDDALDSSSILYARKDSSSVVEWTQAPKERGHRGSEHLNSYEAEWDMVNTVSFKRKPHTNGDAPSHRNGKSK--WSFLFSLTDLKSIKQNKEGMGWSYLVFCLKDDVVLPALHFHQGDSKLLIESLEKYVVLCESPQDKRTLLVNCQNKSLSQS---FENLLDEPAYGLIQAGLLDRRKLLWAIHHWKKIKKDPYTATMIGFSKVTNYIFDSLRGSDPSTHQRPPSEMADFLSDAIPGLKINQQEEPGFEVITRIDLGERPVVQRREPVSLEEWTKNIDSEGRILNVDNMKQMIFRGGLSHALRKQAWKFLLGYFPWDSTKEERTQLQKQKTDEYFRMKLQWKSISQEQEKRNSRLRDYRSLIEKDVNRTDRTNKFYEGQDNPGLILLHDILMTYCMYDFDLGYVQGMSDLLSPLLYVMENEVDAFWCFASYMDQMHQNFEEQMQGMKTQLIQLSTLLRLLDSGFCSYLESQDSGYLYFCFRWLLIRFKREFSFLDILRLWEVMWTELPCTNFHLLLCCAILESEKQQIMEKHYGFNEILKHINELSMKIDVEDILCKAEAISLQMVKCKELPQAVCEILGLQGSEVTTPDSDVG 643
The following BLAST results are available for this feature:
BLAST of TCONS_00047212-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TBC151.315e-12835.05TBC1 domain family member 15 OS=Homo sapiens GN=TB... [more]
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