TCONS_00047241-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047241-protein
Unique NameTCONS_00047241-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length137

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047241-protein ID=TCONS_00047241-protein|Name=TCONS_00047241-protein|organism=Clytia hemisphaerica|type=polypeptide|length=137bp
MGDAIEIKTNWKKKYSLDLESSLLSWIQDVTGEDLSEIKGHDQFRQKFKT
GVTLCQLMNKIKPGCIKTYNKNPKLPFQQMENIGFVNQAMREYGVQSEYI
FVTADLHQGKNLVTVQLGLRNLGDKATANGFQPAFKL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030092XLOC_030092Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047241TCONS_00047241Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003096SM22_calponin
IPR001715CH-domain
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003096Smooth muscle protein/calponinPRINTSPR00888SM22CALPONINcoord: 78..94
score: 42.91
coord: 15..28
score: 39.5
coord: 115..129
score: 36.47
coord: 44..59
score: 44.12
coord: 94..109
score: 37.13
IPR001715Calponin homology domainSMARTSM00033ch_5coord: 19..122
e-value: 6.8E-16
score: 68.8
IPR001715Calponin homology domainPFAMPF00307CHcoord: 19..117
e-value: 1.6E-18
score: 66.8
IPR001715Calponin homology domainGENE3D1.10.418.10coord: 8..136
e-value: 8.4E-27
score: 93.2
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 17..126
score: 15.38
IPR001715Calponin homology domainCDDcd00014CHcoord: 26..112
e-value: 1.57414E-15
score: 66.9507
IPR001715Calponin homology domainSUPERFAMILY47576Calponin-homology domain, CH-domaincoord: 11..131

Blast
[Close]
BLAST of TCONS_00047241-protein vs. Swiss-Prot (Human)
Match: CNN3 (Calponin-3 OS=Homo sapiens GN=CNN3 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.924e-17
Identity = 45/136 (33.09%), Postives = 70/136 (51.47%), Query Frame = 0 
Query:    2 GDAIEIKTNWKKKYSLDLESSLLSWIQDVTGEDLSEIKGHDQFRQKFKTGVTLCQLMNKIKPGCIKTYNKNPKLPFQQMENIGFVNQAMREYGVQSEYIFVTADLHQGKNLVTVQLGLRNLGDKATANGFQPAFKL 137
            G + E+K     KY    E  L +WI++VTG  +        F+   K G+ LC+L+NK++PG +K  N++  L + Q+ENIG   +A++ YG++   IF   DL +  N+  VQ  L  L   A   GF     +
Sbjct:   11 GLSAEVKNKIASKYDHQAEEDLRNWIEEVTGMSIGP-----NFQLGLKDGIILCELINKLQPGSVKKVNES-SLNWPQLENIGNFIKAIQAYGMKPHDIFEANDLFENGNMTQVQTTLVALAGLAKTKGFHTTIDI 140
The following BLAST results are available for this feature:
BLAST of TCONS_00047241-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CNN32.924e-1733.09Calponin-3 OS=Homo sapiens GN=CNN3 PE=1 SV=1[more]
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