TCONS_00047348-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00047348-protein
Unique Name	TCONS_00047348-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	941

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00047348-protein ID=TCONS_00047348-protein|Name=TCONS_00047348-protein|organism=Clytia hemisphaerica|type=polypeptide|length=941bp
MEVDGVDNAWELSKENVQPLKSGRRMGDLTRALQVDSNYLHHEAQSYELE
LRKTGENQQEKLNVWYRYISWREQNYTGINKDTVTLLQNCLVHYKDMKEF
HQNETYIELWLKMTDILDDPIDTFKFMMDNDIGTSLAGFYKSYAEHLELI
GSTKQANEIYNLGIHRNVEPLDWLKEFKSEFEYRMMKRASGESVEEEMEK
VRSRKVLGVLKPMKSGKVGNDRMKNQSSRTKLGSLTSSSRQPSGNRQSGG
FQIYGDESNPGMLSSATGQLKSNPLDPTNNRENVKQMQRVKGTKVKGGSV
SSGACAFEIFKEEEQNTEIHAATPKEIVVSSRKPLSSKKREEVQDPFYSK
TIDDPKVIHKYCRDVINMGTREMSFEEIKAQLPRYDMFKKKDTVAEQRPK
IVRSALDFGHQAATRSLTPEPTEQILPGTPQEPAINRTPSSAKNNTIGDI
LQNLEDEFNSPIESTGYFGSLKTKQPDITGITEIFSNNLQDQEDLTCKMQ
ELDRTEQFGRFPTTAKTIREQGEIDNQLQELDATTQFGRPIPLHRKQTDI
TRQLQELDKTKQFKRTPPLEDPHDTKNAKSASQETFNDTTPFGRTQSTTQ
SRAGVTHLLQAIDDTVLSTNNPSTFSSQPRSNVTCQLNALDDTTHFGKGV
TGGQPYRAPMNATNILNDLDKTRDTSSTFTNINKQGAFQSFNENDTSRIS
MLRQQNASKNDSCDSINNMMFKMKVEGGNTSSLVGNETLGATSSLVGNET
LGATSSPTLENVKQMFQETLDVDRFEYSMKNNLQLMQKQAGFSIFDDDQG
EEKGTSQGFPIFQDEPSQKLSSKPSSGFPIFQDEPTEKPSQAFPIFQDEP
TDKPSQAFPIFQDEPSQKIHSSQGFSIFEDEPSQKISTKPAQGFSVFQDE
PSQKLSQKSSHGFGIFNDXVSRRAISKTITKIIPWIWNLQR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_030161	XLOC_030161	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00047348	TCONS_00047348	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013212	Mad3/Bub1_I
IPR011990	TPR-like_helical_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013212	Mad3/Bub1 homology region 1	SMART	SM00777	mad3_bub1_i	coord: 40..164 e-value: 3.9E-31 score: 119.4
IPR013212	Mad3/Bub1 homology region 1	PFAM	PF08311	Mad3_BUB1_I	coord: 43..164 e-value: 1.7E-31 score: 108.7
IPR013212	Mad3/Bub1 homology region 1	PROSITE	PS51489	BUB1_N	coord: 47..203 score: 39.155
IPR011990	Tetratricopeptide-like helical domain	GENE3D	1.25.40.10		coord: 29..205 e-value: 2.4E-4 score: 20.3

Blast

[Close]

BLAST of TCONS_00047348-protein vs. Swiss-Prot (Human)
Match: BUB1B (Mitotic checkpoint serine/threonine-protein kinase BUB1 beta OS=Homo sapiens GN=BUB1B PE=1 SV=3)

HSP 1 Score: 139.428 bits (350), Expect = 1.429e-33
Identity = 129/445 (28.99%), Postives = 210/445 (47.19%), Query Frame = 0

Query:    1 MEVDGVDNAWELSKENVQPLKSGRRMGDLTRALQVDS---NYLHHEAQSYELELRKTGENQQEKLNVWYRYISWREQNYT--GINKDTVTLLQNCLVHYKDMKEFHQNETYIELWLKMTDILDDPIDTFKFMMDNDIGTSLAGFYKSYAEHLELIGSTKQANEIYNLGIHRNVEPLDWLKEFKSEFEYR-----MMKRASGESVEEEMEKVRSRKVLGVLKPMKSGKVGNDRMKNQSSRTKLGSLTSSSRQPSGNR--------------QSGGFQIYGDESNPGMLSSATGQLKSNPLDPTNNRENVKQM----------QRVKGTKVKGGSVSSGACAFEIFKEEEQNTEIHAATPKEIVVSSRKPLSSKKR-EEVQDPF-----YSKTIDDPKVIHKYCRDVINMGTREMSFEEIKAQLPRYDMFKKKD----TVAEQRPKI 401
            M ++G  + WELSKENVQPL+ GR M  L  AL  +S   N L  + +++E E+R    N  + L+VW RYISW EQNY   G   +  TLL+  +   +  K ++ +  ++ LWLK+  + ++P+D + ++ +  IG SLA FY S+AE  E   + ++A+ I+  GI +  EPL+ L+    +F+ R     ++     E  E     V  R  L  LK    GK        +++R  +  +  + + PS NR              +   F    DE++   LS  T Q    P  P   +EN  Q            R +G      +V +   +F  + EE     +   TP +I  S    LS++K  +E  DP      + +  ++ K    YC++ I  G  E SFEEI+A++ R  + ++++    T AE+R ++
Sbjct:   15 MSLEG--DEWELSKENVQPLRQGRIMSTLQGALAQESACNNTLQQQKRAFEYEIRFYTGN--DPLDVWDRYISWTEQNYPQGGKESNMSTLLERAVEALQGEKRYYSDPRFLNLWLKLGRLCNEPLDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQKAEPLERLQSQHRQFQARVSRQTLLALEKEEEEEVFESSVPQRSTLAELK--SKGK--------KTARAPIIRVGGALKAPSQNRGLQNPFPQQMQNNSRITVFDENADEASTAELSKPTVQPWIAPPMP-RAKENELQAGPWNTGRSLEHRPRGNTASLIAVPAVLPSFTPYVEETARQPV--MTPCKIEPSINHILSTRKPGKEEGDPLQRVQSHQQASEEKKEKMMYCKEKIYAGVGEFSFEEIRAEVFRKKLKEQREAELLTSAEKRAEM 442

The following BLAST results are available for this feature:

BLAST of TCONS_00047348-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00047348-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
BUB1B	1.429e-33	28.99	Mitotic checkpoint serine/threonine-protein kinase...	[more]

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TCONS_00047348-protein (polypeptide) - C. hemisphaerica