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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00047425-protein ID=TCONS_00047425-protein|Name=TCONS_00047425-protein|organism=Clytia hemisphaerica|type=polypeptide|length=406bp
FSVFQSYDLIPTHLDFQPKSGRYNFSLFFEEEKKKPSKSCNFTYSHQLGK
LFAQKNVDVPITFKTSIALPENFQIRSYLAFDGDTYRSHPVEKCPADLKE
WKNMTGENHIIINNKPDTIYSQCSSGHYVTITSGFRTEKTKKEFSDAFSF
TCFTTCRGGINRRDVSLLFALYSNNQFYGQAKVPVVICSSPGRDRISKEK
KLMKATCKTIKKDENPIPTPPTNDIPSPPPPTPPTSAVTRSGKRKMVAYN
FPTDVGTLVDTNPPPNKIYTMQVKGYERFLLMQSLNKAMEDAHKFRELQK
GSVPLTPREPSSSPPPDNSLILTNKGMGRIRNHDFATKSTSNPYLDENKV
YHKNYRKFEEIRRKVQVRSFKLERSQSDPSEGIPTVRRSRVIFPRSIITN
PDGIGH Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
| GO:0006915 | apoptotic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0003700 | transcription factor activity, sequence-specific DNA binding |
| GO:0044212 | transcription regulatory region DNA binding |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006915 |
apoptotic process |
| biological_process |
GO:0006355 |
regulation of transcription, DNA-templated |
| cellular_component |
GO:0005634 |
nucleus |
| molecular_function |
GO:0003677 |
DNA binding |
| molecular_function |
GO:0003700 |
transcription factor activity, sequence-specific DNA binding |
| molecular_function |
GO:0044212 |
transcription regulatory region DNA binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR002117 | p53 tumour suppressor family | PRINTS | PR00386 | P53SUPPRESSR | coord: 150..172
score: 37.32
coord: 177..199
score: 39.73
coord: 34..60
score: 38.68
coord: 76..97
score: 18.31 |
| IPR012346 | p53/RUNT-type transcription factor, DNA-binding domain | GENE3D | 2.60.40.720 | | coord: 10..205
e-value: 4.4E-38
score: 130.7 |
| IPR011615 | p53, DNA-binding domain | PFAM | PF00870 | P53 | coord: 20..201
e-value: 1.1E-16
score: 61.0 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 211..241 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 298..318 |
| IPR008967 | p53-like transcription factor, DNA-binding | SUPERFAMILY | 49417 | p53-like transcription factors | coord: 19..199 |
Blast
The following BLAST results are available for this feature:
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