TCONS_00047665-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047665-protein
Unique NameTCONS_00047665-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length273

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047665-protein ID=TCONS_00047665-protein|Name=TCONS_00047665-protein|organism=Clytia hemisphaerica|type=polypeptide|length=273bp
MSTTYFPSMFIILALIFFQQKLVMSSDCTSRGTNCTSCLSDGHCGFCDSC
GDYCHQSKTLHSFENCTHCAQCVPGTLSGPKKGHTCRHEWYYYEKCPEVV
SVKKTVYVGIALYLVNLHSVDMKGGTFHADFYLYFKVPPGQTLYTKQKCK
NIGLNGACFDLVNAAGAAEVSLHEGKYFRVKGKFNFAADLANFPFDNQTL
KIEVQDMEMTAKELRWRLLESTVDQDRPFKFKSGISPTLNYTGWVFDPYS
WTQIVYERYSFFFILSSRVHVFL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030353XLOC_030353Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047665TCONS_00047665Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006202Neur_chan_lig-bd
Vocabulary: Biological Process
TermDefinition
GO:0006811ion transport
Vocabulary: Molecular Function
TermDefinition
GO:0005230extracellular ligand-gated ion channel activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006811 ion transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005230 extracellular ligand-gated ion channel activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 197..217
IPR006202Neurotransmitter-gated ion-channel ligand-binding domainGENE3D2.70.170.10coord: 176..272
e-value: 9.7E-5
score: 21.3

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047665-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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