TCONS_00047773-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047773-protein
Unique NameTCONS_00047773-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1997

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047773-protein ID=TCONS_00047773-protein|Name=TCONS_00047773-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1997bp
DLKGVGNISTDTSKVLSHDIVMLLKDFSLKLQQPNTATPLLHQSQALQLH
LDSIELILYNLSTSMQEDKEFVNLIWQVLCPALIQLLGSPINDINTRNRQ
IGLTNGFPDDGRGARGMSTNKSLNPVMARTIYVIAGELVRLVGALNSLRP
TLESLFHRIVLYSQPQHRIEALKVIQEILGSPQRIFDLAGPTIDDREPGT
PESPTDQRKTDLDLFRLIMDGIQESSNQSDPSVSNASVSCVVALLGTLED
LSNGRGLSDENIEMLHKVKEPLNIQELSGKAVLYDNGMAPTLKCSSLDSG
ESEAESDEERPSKSKHIRWQMDYEENEYNSTFEDDDVILPKSVSWAEHNE
ERIIENREMMANPQKYKNKIEPPRKSPSPKLKSHYPAVRAKTDSGLKLPK
LKRHQFNYTNLSRSHSATDLREPKTSIKIHKGIQKFPLRRVQSYSQLEIK
DKQPSKVEQVVINHAFFEKERKRNLKLRQPSRNSKQTSDEAQQRSPKPIL
RKSNRFFGEEEKGGGVPSDQQQQFPDSDIFGVLPQPIKPIAKPLPKDSNK
KKIEIENTSPSKETTINGIPLSKIQRQKASQSKKSAKKPNSLKLKQTPPK
EGQASSPKKSSIKADSPKKTSAKTPEELEKEGARNFARCLLGILPSVLKA
TEPSAADELLQQFASDVCEAVTCMTLKRKNVPNFGTVRTLDMKTAEENGK
ETNDPSLNAECVYKAVYEALKLSYELNQLGYYEKSGATPHVSQNSFIQSV
VDFGFPVRLSRTWLSEVYRLITTYDILSKAGYHPESSDTNRALIGILSEK
IYTHHPNRIKETDEIGTSGKFRDPITAGKREGQKFARRLLLSTWDQVLDT
LAVPLSSTTQISSDSAGMKFLINNTNVNNRAELQSKQMLERDLVCLSLDG
FRRAARLCCDLDIQSRCDIILSRLSEASCGYFINEKKQLSKNGIPPSVKL
HAAHVLSMDALLAAGLELGSRAPQAWNHVFRCCMYISNLEHASFDSPTGG
SSPNYPPAPPSGAHPHLQLQLQKSNILSPDYYSTDEDSDMSPDSTNSFPD
DRNLSNSRANTSLTLNGILPAEDACRAVFALSSAVDNLFDMAATTLPLKA
FREFLASLVEASHDQLFSDQAKLSERPLDKAAIKETLISMNTLHLYHICD
VMLRCARNNTRPLLHVMEAWSIISSHLVEAAYSKEKHISKVALTSIHDIL
SELLKRRNELPHFWFYDALFKPFETLMSADGCEDDIHDQILYTLYELVEG
FGPSIKSGWRSLFNAVSHAQIDNRSNLNDFNDGEQRRKLVFNMIEHFVQL
KTTNVFSSSVVSAVLCLLKFIRGGREFTNTSEDSFDFPPCLDDPRSDTDS
QSSEPSPEHDLCEPSLDILLQISKRLSTIYLQPSSVIFHGSYSILLVNIA
ESHDKVWDDNWSCGSSTTTSPDAESKPAILSTANSIVAIDDTGVLRIWFL
ILEGLTSSVANSPKRYQPMIIQSFFEILNSLTAVPGPHFSMFAISNLLLP
MLQAWVERGARKKTYWDYTLNNFKHACGLATQLVADEIGHFLEVEGAVEC
VPLMLKQLLDLFHDCVSQHIEVIARLGCSCLRHLLLSAGSQFTEELWHIL
CLGIKQIVDSTLSQTRQLIDCFVPNSKSVTGDNGFQVKIVARRDVTPTES
LRALQLAEQVFLLESQLTVTSPRSESDLDEDDNRSYIFLISPMDDKKKDE
KIRVPFRSLTISLLSNQILIQMLGSILLESADSAVHGSIISTITEAGLIK
RINEEKSLPGLLNYLSPLNLNILFGCLLDTHDVAHEFNTRPGLRSLTQKL
GRFHVPANLLRTSITSFAFYLNTLFQISKYDGEHFSISNTKRILTGEKVL
LEVVSPESPHKSSINPAKLELLKNSENIDWVIRRLHEACNQISTMYHKLH
QTETFIEQDSGFIDNSSSTLSTPQASPHKNLSDVSEESLDVSRLMKGAYI
DKKSSPFRLRKRGGQLDTQSTDSSSTKMNLIDPKKREDDLLXYTKYR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030410XLOC_030410Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047773TCONS_00047773Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR015403Sec7_C
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 23..1660
e-value: 1.7E-12
score: 46.0
IPR015403Sec7, C-terminalPFAMPF09324DUF1981coord: 1207..1277
e-value: 1.8E-9
score: 37.2

Blast
BLAST of TCONS_00047773-protein vs. Swiss-Prot (Human)
Match: BIG3 (Brefeldin A-inhibited guanine nucleotide-exchange protein 3 OS=Homo sapiens GN=ARFGEF3 PE=1 SV=3)

HSP 1 Score: 621.313 bits (1601), Expect = 0.000e+0
Identity = 421/1334 (31.56%), Postives = 658/1334 (49.33%), Query Frame = 0
Query:  626 EELEKEGARNFARCLLGILPSVLKATEPSAADELLQQFASDVCEAVTCMTLKRKNVPNFGTVRTLDMKTAEENGKETNDPSLNAECVYKAVYEALKLSYELNQLGYYEKSGATPHVSQNSFIQSVVDFGFPVRLSRTWLSEVYRLITTYDILSKAGYHPESSDTNRALIGILSEKIYTHHPNRIKETDEIGTSGKFRDPITAGKR------EGQKFARRLLLSTWDQVLDTLAVPLSSTTQISSDSAGMKFLINNTNVNNRAELQSKQMLERDLVCLSLDGFRRAARLCCDLDIQSRCDIILSRLSEASCGYF------------------INEKKQLSKNGIPPSVKLHAAHVLSMDALLAAGLELGSRAPQAWNHVFRCCMYISNLEHASFDSPTGGSSPNYPPAPPSGAHPHLQLQLQKSNILSPDYYSTDEDSDMS--PDSTNSFPDDRNLSNSRANTSLTLNG-ILPAEDACRAVFALSSAVDNLFDMAATTLPLKAFREFLASLVEASHDQLFSDQAKLSERPLDK-AAIKETLISMNTLHLYHICDVMLRCARNNTRPLLHVMEAWSIISSHLVEAAYSKEKHISKVALTSIHDILSELLKRRNELPHFWFYDALFKPFETLMSADGCEDDIHDQILYTLYELVEGFGPSIKSGWRSLFNAVSHAQIDNRSNLNDFNDGE----QRRKLVFNMIEHFVQLKTTNVFSSSVVSAVLCLLKFIRGGREFTNTSEDSFDFPPCLDDPRSDTDSQSSEPSPEHDLCEPSLDILLQISKRLSTIYLQPSSVIF-HGSYSILLVNIAESHDKVWDDNWSCGSSTTTSPDAESKPAILSTANSIVAIDDTGVLRIWFLILEGLTSSVANSPKRYQPMIIQSFFEILNSLTAVPGPHFSMFAISNLLLPMLQAWVERGARKKTYWDYTLNNFKHACGLATQLVADEIGHFLEVEGAVE-CVPLMLKQLLDLFHDCVSQHIEVIARLGCSCLRHLLLSAGSQFTEELWHILCLGIKQIVDSTLSQTRQLIDCFVPNSKSVTGDNGFQVKIVARRDVTPTES--LRALQLAEQVFLLESQLTVTSPRSESDLDEDDNRSYIFLISPMDDKKKDEKIRVPFRSLTISLLSNQILIQMLGSILLESADSAVHGSIISTITEAGLIKRIN-EEKSLPGLLNYLSPLNLNILFGCLLDTHDVAHEFNTRPGLRSLTQKLGRFHVPANLLRTSITSFAFYLNTLFQISKYDGEHFSISNTKRIL----------------TGEKVLLEV--VSPESPHKSSINPAKLELL--KNSENIDWV--IRRLHEACNQISTMYHKLH 1900
            +E ++  AR F + L G+LP +L  +     D  LQ FAS  C  +        + P F    +L  +             +NA+ +Y A + AL L+ +L+   YY K           F++ V   G  +  S+ W+ E+Y  +   ++L +AGY     D +  LI +L++ I     + I    ++  S     P    +R       G  FAR +L+  W  ++DTL+ PL  T +++  S G+ F++    +  + +       ERD +C+SLDG R+AARL C L + + C   L++++ ASC                     +  +++L + G    V LH AHVL M+A+L+ GLE+GS  P  W HVFR C Y+  LEH  F    G S P    + P  A     L        SP  +S ++   +S  P        D     SR   S    G ++    A + V  LS+  D LF+ A   L L A   FL  L +AS  QLF       +  L     +K T    + LHL+ + + MLR  R+  RPLLHVM  WS+++ HLVEAA  KE+H+S+ A++ IHDIL+E+L   NE PHF F +ALF+PFE +M  + C++D+ DQ++ ++ ELVE     I+SGWR LF+A+      N+S + ++  G+    + +  VF++ E F+      VF+++  S ++CL+KF++G  E                D +   D   +  +P  DLC P+LD L + S+ L+ IY  P   IF  G  + L   + E              S ++    ES   +LS  +     DDTG++ +W ++LE LT++V+N P+++QP  +   FE+L  +T  PGP F ++A+ +LLLP++  W+ R  +  +YWD    NFKHA GL+ +LV + I  FL  +   E  +  MLK L +L   CV++  E I+R+GCSC+R++L++AG  FTEE+W + C  ++    +TL   + L+ CF   ++S +G+ G QV++ A       E+   R   +A+QVF+L++Q    SP++ ++ D   +   I  + P +      K  V FR + +SLLS+Q+L+Q L  ILLE     V G         G  K I   E  L G L Y+S  NL ++F  LLD++  A EF+T PGL+ L +K+      ANL R S  SF  Y + L      + E  +    K++L                  E +  E   VSP    +     A++ LL  +   N DWV  ++RLH+ C ++   Y ++H
Sbjct:  666 QEADQHSARLFIQSLEGLLPRLLSLSNVEEVDTALQNFASTFCSGMM-------HSPGFDGNSSLSFQML-----------MNADSLYTAAHCALLLNLKLSHGDYYRKRPTLAPGVMKDFMKQVQTSGVLMVFSQAWIEELYHQVLDRNMLGEAGYWGSPEDNSLPLITMLTD-IDGLESSAIG--GQLMASAATESPFAQSRRIDDSTVAGVAFARYILVGCWKNLIDTLSTPL--TGRMAGSSKGLAFILGAEGIKEQNQK------ERDAICMSLDGLRKAARLSCALGVAANCASALAQMAAASCVQEEKEEREAQEPSDAITQVKLKVEQKLEQIGKVQGVWLHTAHVLCMEAILSVGLEMGSHNPDCWPHVFRVCEYVGTLEHNHFSD--GASQPPLTISQPQKATGSAGLLGDPECEGSPPEHSPEQGRSLSTAPVVQPLSIQDLVREGSRGRASDFRGGSLMSGSSAAKVVLTLSTQADRLFEDATDKLNLMALGGFLYQLKKASQSQLFHSVTDTVDYSLAMPGEVKSTQDRKSALHLFRLGNAMLRIVRSKARPLLHVMRCWSLVAPHLVEAACHKERHVSQKAVSFIHDILTEVLTDWNEPPHFHFNEALFRPFERIMQLELCDEDVQDQVVTSIGELVEVCSTQIQSGWRPLFSALETVHGGNKSEMKEYLVGDYSMGKGQAPVFDVFEAFLNTDNIQVFANAATSYIMCLMKFVKGLGEV---------------DCKEIGDCAPAPGAPSTDLCLPALDYLRRCSQLLAKIYKMPLKPIFLSGRLAGLPRRLQE-------------QSASSEDGIES---VLSDFD-----DDTGLIEVWIILLEQLTAAVSNCPRQHQPPTLDLLFELLRDVTKTPGPGFGIYAVVHLLLPVMSVWLRRSHKDHSYWDMASANFKHAIGLSCELVVEHIQSFLHSDIRYESMINTMLKDLFELLVACVAKPTETISRVGCSCIRYVLVTAGPVFTEEMWRLACCALQDAFSATLKPVKDLLGCFHSGTESFSGE-GCQVRVAAPSSSPSAEAEYWRIRAMAQQVFMLDTQ---CSPKTPNNFDHAQSCQLIIELPPDEKPNGHTKKSVSFREIVVSLLSHQVLLQNLYDILLE---EFVKGP------SPGEEKTIQVPEAKLAGFLRYISMQNLAVIFDLLLDSYRTAREFDTSPGLKCLLKKVSGIGGAANLYRQSAMSFNIYFHALVCAVLTNQETITAEQVKKVLFEDDERSTDSSQQCSSEDEDIFEETAQVSPPRGKEKRQWRARMPLLSVQPVSNADWVWLVKRLHKLCMELCNNYIQMH 1919          

HSP 2 Score: 192.971 bits (489), Expect = 5.694e-49
Identity = 112/263 (42.59%), Postives = 166/263 (63.12%), Query Frame = 0
Query:   12 TSKVLSHDIVMLLKDFSLKLQQPNTATPLLHQSQALQL-HLDSIELILYNLSTSMQEDKEFVNLIWQVLCPALIQLLGSPIND----------INTRNRQIGLTNGFPDDGRGARGMSTNKSLNPVMARTIYVIAGELVRLVGALNSLRPTLESLFHRIVLYSQPQHRIEALKVIQEILGSPQRIFDLAGPTIDDREPGTPESPTDQRKTDLDLFRLIMDGIQESSNQSDPSVSNASVSCVVALLGTLEDLSNGRGLSDENIE 263
            T + L  D+V +L     KLQ        ++ SQ LQL +L+ I  +L + S+SM   + F +LIW+ LCPALI +LG+PI+D           +T       + G  D GRG+    T  +L+  +ARTIY IA ELVRLVG+++S++P L+SL+HR++LY  PQHR+EA+K+++EILGSPQR+ DLAGP+  + E  + +    +RK+ LDL +LIMDG+ E+  +       A+VSCV  LLG L++LS G+GLS+  ++
Sbjct:  198 TVESLCDDVVSVLTVLCEKLQAA------INDSQQLQLLYLECILSVLSSSSSSMHLHRRFTDLIWKNLCPALIVILGNPIHDKTITSAHTSSTSTSLESDSASPGVSDHGRGSGCSCTAPALSGPVARTIYYIAAELVRLVGSVDSMKPVLQSLYHRVLLYPPPQHRVEAIKIMKEILGSPQRLCDLAGPSSTESE--SRKRSISKRKSHLDLLKLIMDGMTEACIKGGIEACYAAVSCVCTLLGALDELSQGKGLSEGQVQ 452          
The following BLAST results are available for this feature:
BLAST of TCONS_00047773-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BIG35.694e-4931.56Brefeldin A-inhibited guanine nucleotide-exchange ... [more]
back to top