TCONS_00047804-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047804-protein
Unique NameTCONS_00047804-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length701

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047804-protein ID=TCONS_00047804-protein|Name=TCONS_00047804-protein|organism=Clytia hemisphaerica|type=polypeptide|length=701bp
MMTQTLLEESKLLTRTNVFDESANAENLALIKSNSDGETKKTNRSPLKKF
NSDSIPKSLESEDIFQVTNSNGDIGSITKNIDLSVDCKGGIEPLNSDHFH
GTEEDDEESEEHKQTFKHLYPQVLVQGSHEFSDIDSDEEDFQLRRHRKND
SGQGSSVETSSLKSNPHDFYQVDISFDETLDCNSIEDSEALDHVLNDPDF
SLNNIAQSHQRRHSSFTSRRTVDLSNEDSEIDFTDIPLNTPSPAKAVNTY
TPSNEQQLLPSSQTPLKPPSVMDTPPKQGFLKRANQKSWKIFGKVAVPVE
KEPSPSVSPNLLRKQKKETVGSSTTALIFENRPLHLPPKSAKEEQKHREQ
YENMIAFAKRKELKDKEVEKKKLKERQKLENQISNIVTRWKEDIIPNWHN
CKSTRKVRDLWWAGVPPSVRGKVWSLAIGNDLNITKELFQIFSANARDRI
RNQKNPEPVANLHDSESSLVVSKENTVGLITLDVSRTFPSLCIFQKGGPY
HEPLKNLLAAYTCFRPDVGYVQGMSFLAAMFLLNLDTFDAFVAFANLLNR
PCQMAFFMVDQPMMDAYYRTFDVLLEDQIPKLYTHMKKQCLSHDIYLIDW
IFTLFSKSLPLDTACRVWDLFCRDGEEFLFRTALGILLMSEDVLLEMEFF
RLAQYLTKLSNTITSDVLFKYIEKINFSKQKLTQTLSYYKQIARTNPPLP
T
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030418XLOC_030418Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047804TCONS_00047804Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 341..376
NoneNo IPR availableGENE3D1.10.8.270coord: 451..549
e-value: 8.9E-24
score: 83.1
NoneNo IPR availableGENE3D1.10.10.750coord: 372..430
e-value: 1.1E-17
score: 63.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..113
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 232..272
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..164
IPR000195Rab-GTPase-TBC domainSMARTSM00164tbc_4coord: 411..648
e-value: 1.2E-56
score: 204.2
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 418..644
e-value: 5.0E-49
score: 166.8
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 414..625
score: 33.608
IPR000195Rab-GTPase-TBC domainSUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 560..675
IPR000195Rab-GTPase-TBC domainSUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 388..585

Blast
[Close]
BLAST of TCONS_00047804-protein vs. Swiss-Prot (Human)
Match: TBC14 (TBC1 domain family member 14 OS=Homo sapiens GN=TBC1D14 PE=1 SV=3)

HSP 1 Score: 460.685 bits (1184), Expect = 2.625e-153
Identity = 225/432 (52.08%), Postives = 296/432 (68.52%), Query Frame = 0 
Query:  281 LKRANQKSWKIFGKVAVP---------VEKE-------PSPSVSPNLLRKQKKETVGSSTTALIFENRPLHLPPKSAKEEQKHREQYENMIAFAKRKELKDKEVEKKKLKERQKLENQISNIVTRWKEDIIPNWHNCKSTRKVRDLWWAGVPPSVRGKVWSLAIGNDLNITKELFQIFSANARDRIRNQKNPEPVANLHDSESSLVVSKENTVGLITLDVSRTFPSLCIFQKGGPYHEPLKNLLAAYTCFRPDVGYVQGMSFLAAMFLLNLDTFDAFVAFANLLNRPCQMAFFMVDQPMMDAYYRTFDVLLEDQIPKLYTHMKKQCLSHDIYLIDWIFTLFSKSLPLDTACRVWDLFCRDGEEFLFRTALGILLMSEDVLLEMEFFRLAQYLTKLSNTITSDVLFKYIEKINFSK--QKLTQTLSYYKQIAR 694
            L + N   WK+FGK  +          ++KE       PS   SP    ++  +    STTALI E+RP +LP K A+E QKHR+QYE M+  AK++ELK+ +  KK+L+ER ++E  I N V  W  +I+PNW     +RKVRDLWW G+PPSVRGKVWSLAIGN+LNIT ELF I  A A++R R+           D+  S    +E ++ LI LD+SRTFP+LCIFQ+GGPYH+ L ++L AYTC+RPDVGYVQGMSF+AA+ +LNLDT DAF+AF+NLLN+PCQMAFF VD  +M  Y+  F+V  E+ +PKL+ H KK  L+ DIYLIDWIFTL+SKSLPLD ACR+WD+FCRDGEEFLFRTALGIL + ED+L +M+F  +AQ+LT+L   + ++ LF  I  I      +K  Q L+  ++ +R
Sbjct:  252 LDKHNDLGWKLFGKAPLRENAQKDSKRIQKEYEDKAGRPSKPPSPKQNVRKNLDFEPLSTTALILEDRPANLPAKPAEEAQKHRQQYEEMVVQAKKRELKEAQRRKKQLEERCRVEESIGNAVLTWNNEILPNWETMWCSRKVRDLWWQGIPPSVRGKVWSLAIGNELNITHELFDICLARAKERWRSLSTGGSEVENEDAGFS-AADREASLELIKLDISRTFPNLCIFQQGGPYHDMLHSILGAYTCYRPDVGYVQGMSFIAAVLILNLDTADAFIAFSNLLNKPCQMAFFRVDHGLMLTYFAAFEVFFEENLPKLFAHFKKNNLTPDIYLIDWIFTLYSKSLPLDLACRIWDVFCRDGEEFLFRTALGILKLFEDILTKMDFIHMAQFLTRLPEDLPAEELFASIATIQMQSRNKKWAQVLTALQKDSR 682
The following BLAST results are available for this feature:
BLAST of TCONS_00047804-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TBC142.625e-15352.08TBC1 domain family member 14 OS=Homo sapiens GN=TB... [more]
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