TCONS_00047872-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047872-protein
Unique NameTCONS_00047872-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length339

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047872-protein ID=TCONS_00047872-protein|Name=TCONS_00047872-protein|organism=Clytia hemisphaerica|type=polypeptide|length=339bp
MSLDSEKGLKNLCNYALSSKCSSIYPYQKMQEMFVKNDGDFVSIYLRKLN
TKDQKKGDLVNPRCCEKVISTLEDCAVDDVCKAVIINGIEEYFASSSIFE
KLLKKTPALEGKKYEEDVSMLRYLIQTIRNFNKPIVAVIRKTAIGFPASL
LSLFDMVFHERETEKASHTSKQSNVGRKKTLNKQPSEDVEDSEVSCPSTE
TECQSFVFPRLMGLTQNNESRIMGEDTRLLSPTDCTENVDCLNEAPLSQQ
LRNSLRHMRSNSKIQIKRRGRSQSEISEPANDEESGDEEEEEVDDVMLPA
RQSNHLEQLERLEREILQEKERTEKYMSELFSYMNSLDE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030468XLOC_030468Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047872TCONS_00047872Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001753Crotonase_core_superfam
IPR029045ClpP/crotonase-like_dom
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0003824 catalytic activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 302..329
NoneNo IPR availableGENE3D3.90.226.10coord: 27..228
e-value: 4.7E-9
score: 35.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..305
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 165..196
IPR001753Crotonase superfamilyPFAMPF00378ECH_1coord: 60..162
e-value: 8.0E-7
score: 28.5
IPR029045ClpP/crotonase-like domainSUPERFAMILY52096ClpP/crotonasecoord: 54..161

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047872-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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