TCONS_00047875-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047875-protein
Unique NameTCONS_00047875-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length533

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047875-protein ID=TCONS_00047875-protein|Name=TCONS_00047875-protein|organism=Clytia hemisphaerica|type=polypeptide|length=533bp
MGVSTTCTTTYEKLKISVPDCTYLMQLYIYKNIQFSEALIKRAENLGFKA
ILLTVDAPTIGNRIADVKNKFGIASSMKFENFKGLLSHTNESLKSYVQSN
FKSSLSWDDLKWLRSVTTLPIYLKGIMTREDAGKCLDHDVQGIIVSNHGG
RQLDGVPATIDVLTEVVQAVGHRIPVYIDGGIRSGSDVFKALALGANGVF
IGRPVVYGLSYNGSKGVQEVLQHITDELKSIMRLTGCRRISDINSTLIYH
ESQFGIYSKPKIVRHWKLTPEAPICVADIKEGAKQYGFPIDEDIERIYEE
AFQRLRLRPRRLCGLPPFERMNDLMPICLLDHEDTHEMISICNVKEACYL
EIENEKVDKEKLDKRKYNGLVIDIRHSNFNMIKKVKSEARLPVLITGVMS
KDDALECLDYQPDGIIITCQNTIDQLTAIDALPEIADVIKRRIPIYLYGG
IRKGTDIIKALARGASKVFVKEPLLWAYSYKGSSGTLKALEILNSEFRRS
MYLAGCKDFDAIKPSLVVSEQYSFNKSANLSKY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030470XLOC_030470Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047875TCONS_00047875Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013785Aldolase_TIM
IPR000262FMN-dep_DH
IPR008259FMN_hydac_DH_AS
IPR012133Alpha-hydoxy_acid_DH_FMN
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016491oxidoreductase activity
GO:0010181FMN binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0003824 catalytic activity
molecular_function GO:0010181 FMN binding
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 1..253
e-value: 2.2E-66
score: 223.9
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 327..526
e-value: 4.0E-24
score: 84.6
IPR000262FMN-dependent dehydrogenasePFAMPF01070FMN_dhcoord: 375..517
e-value: 6.9E-35
score: 120.6
coord: 1..248
e-value: 9.3E-87
score: 291.2
IPR008259FMN-dependent alpha-hydroxy acid dehydrogenase, active sitePROSITEPS00557FMN_HYDROXY_ACID_DH_1coord: 146..152
IPR012133Alpha-hydroxy acid dehydrogenase, FMN-dependentPROSITEPS51349FMN_HYDROXY_ACID_DH_2coord: 306..522
score: 23.016
IPR012133Alpha-hydroxy acid dehydrogenase, FMN-dependentPROSITEPS51349FMN_HYDROXY_ACID_DH_2coord: 1..253
score: 72.469
NoneNo IPR availableCDDcd02809alpha_hydroxyacid_oxid_FMNcoord: 1..244
e-value: 3.31886E-98
score: 300.903
NoneNo IPR availableSUPERFAMILY51395FMN-linked oxidoreductasescoord: 368..517
NoneNo IPR availableSUPERFAMILY51395FMN-linked oxidoreductasescoord: 2..247

Blast
[Close]
BLAST of TCONS_00047875-protein vs. Swiss-Prot (Human)
Match: HAOX1 (Hydroxyacid oxidase 1 OS=Homo sapiens GN=HAO1 PE=1 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 2.187e-79
Identity = 117/256 (45.70%), Postives = 181/256 (70.70%), Query Frame = 0 
Query:    1 MGVSTTCTTTYEKLKISVPDCTYLMQLYIYKNIQFSEALIKRAENLGFKAILLTVDAPTIGNRIADVKNKFGIASSMKFENFK-GLLSHTNE-------SLKSYVQSNFKSSLSWDDLKWLRSVTTLPIYLKGIMTREDAGKCLDHDVQGIIVSNHGGRQLDGVPATIDVLTEVVQAVGHRIPVYIDGGIRSGSDVFKALALGANGVFIGRPVVYGLSYNGSKGVQEVLQHITDELKSIMRLTGCRRISDINSTLI 248
            M +S+  T++ E++  + P+    +QLYIYK+ + ++ L+++AE +G+KAI +TVD P +GNR+ DV+N+F +   ++ +NF+   LS + E        L +YV      S+SW+D+KWLR +T+LPI  KGI+  +DA + + H + GI+VSNHG RQLDGVPATIDVL E+V+AV  ++ V++DGG+R G+DV KALALGA  VF+GRP+V+GL++ G KGVQ+VL+ + +E +  M L+GC+ +  I+ TL+
Sbjct:  105 MMLSSWATSSIEEVAEAGPEALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSISWEDIKWLRRLTSLPIVAKGILRGDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVKVIDKTLV 360

HSP 2 Score: 112.079 bits (279), Expect = 6.384e-27
Identity = 55/148 (37.16%), Postives = 91/148 (61.49%), Query Frame = 0 
Query:  382 IKKVKSEARLPVLITGVMSKDDALECLDYQPDGIIITCQNT--IDQLTA-IDALPEIADVIKRRIPIYLYGGIRKGTDIIKALARGASKVFVKEPLLWAYSYKGSSGTLKALEILNSEFRRSMYLAGCKDFDAIKPSLVVSEQYSFNK 526
            IK ++    LP++  G++  DDA E + +  +GI+++      +D + A ID LPEI + ++ ++ ++L GG+RKGTD++KALA GA  VFV  P++W  +++G  G    LEIL  EFR +M L+GC++   I  +LV     + +K
Sbjct:  222 IKWLRRLTSLPIVAKGILRGDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVKVIDKTLVRKNPLAVSK 369
The following BLAST results are available for this feature:
BLAST of TCONS_00047875-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HAOX12.187e-7945.70Hydroxyacid oxidase 1 OS=Homo sapiens GN=HAO1 PE=1... [more]
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