TCONS_00047879-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00047879-protein
Unique Name	TCONS_00047879-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	329

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00047879-protein ID=TCONS_00047879-protein|Name=TCONS_00047879-protein|organism=Clytia hemisphaerica|type=polypeptide|length=329bp
MGFTRSTLTTELLRRDEIDSSFHDPYILNGYRPPDKGVWRTLQYSLNSQC
NESFNTWSHAIACVYFMARFYHAFKGHWQDPLYYPLMSLSIGILAVFSMS
TLAHALNSLSKKTRNRCFFFDYAGISIYGLGSGQVMYFYCRKLGTSEDST
SLYLFLTASLATSVITNILMCSTRHRWCQSKVLYRTVSCLMPFLVNSLPY
FYRLSCCGELADNCDVTHLRIYLKHVLFLLLTALSNVFKLPERRYPGRFD
ALGQSHHFVHVFIALACEDMFEFSFKEMGRRASVIPMNSITPDFYNSILF
TSAGVLGNLLIAIFFNNDAEATKERLKEH

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_030471	XLOC_030471	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00047879	TCONS_00047879	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004254	AdipoR/HlyIII-related

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004254	AdipoR/Haemolysin-III-related	PFAM	PF03006	HlyIII	coord: 50..266 e-value: 7.8E-30 score: 104.2

Blast

[Close]

BLAST of TCONS_00047879-protein vs. Swiss-Prot (Human)
Match: PAQR9 (Membrane progestin receptor epsilon OS=Homo sapiens GN=PAQR9 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.661e-28
Identity = 90/298 (30.20%), Postives = 130/298 (43.62%), Query Frame = 0

Query:   11 ELLRRDEIDSSFHDPYILNGYRPPDKGVWRTLQYSLNSQCNESFNTWSHAIACVYFMARFYHAF-----KGHWQDPLYYPLMSLSIGILAVFSMSTLAHALNSLSKKTRNRCFFFDYAGISIYGLGSGQVMYFYC-----------------RKLGTSEDSTSLY-----LFLTASLATSVITNILMCSTRHRWCQSKVLYRTVSCLMPFLVNSLPYFYRLSCCGELADNCDVTHLRIYLKHVLFLLLTALSNVFKLPERRYPGRFDALGQSHHFVHVFIALACEDMFEFSFKEMGRR 281
             LLR DE+   F + +IL+GYR         L  S+    NE+ N W+H I  + F+++F   F        +  P   PL   + G+L  F+MS  AH  + LS + R   F+ DYA IS YG GS    Y+Y                  ++LG   D T L      L L  +   +V   +  C +R  WC      RT   +MP L  + P     S   +L        +  Y ++  +L++ A  NV K+PER  PG FD +G SH   H+F  L+  D  +  + E G R
Sbjct:   43 PLLRWDEVPDDFVECFILSGYRRLPCTAQECLA-SVLKPTNETLNFWTHFIPLLLFLSKFCRLFFLSGGDVPFHHPWLLPLWCYASGVLLTFAMSCTAHVFSCLSLRLRAAFFYLDYASISYYGFGSTVAYYYYLLPGLSLLDARVMTPYLQQRLGWHVDCTRLIAAYRALVLPVAFVLAVACTVACCKSRTDWCTYPFALRTFVFVMP-LSMACPIMLE-SWLFDLRGENPTLFVHFYRRY-FWLVVAAFFNVSKIPERIQPGLFDIIGHSHQLFHIFTFLSIYD--QVYYVEEGLR 334

The following BLAST results are available for this feature:

BLAST of TCONS_00047879-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00047879-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
PAQR9	6.661e-28	30.20	Membrane progestin receptor epsilon OS=Homo sapien...	[more]

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TCONS_00047879-protein (polypeptide) - C. hemisphaerica