TCONS_00047889-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047889-protein
Unique NameTCONS_00047889-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length373

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047889-protein ID=TCONS_00047889-protein|Name=TCONS_00047889-protein|organism=Clytia hemisphaerica|type=polypeptide|length=373bp
MMASEIKVCVIGLGELGTRIAGELSLNYGLRVHVFDNDKLKMKDVNYQIT
QQKEELIRNGLISPVDSYGDVETFETLQEALIDVDFVFEAIVDRLDVKQW
LYEKITHNCKSDTVVCSNTLQLNLEDIAESCLFKNRVIGCRFLVPVYRIP
LVEMMYTSMTSIDIVRKVKTFFQRIEKQVVVRQPDEKPRILTLKESREFW
EEAKEKVRRDQLIQNTIASHGSFLTPATILNTDNSPCKYDHESVDENSLE
QHSDTSLSKCDQGAILKQPGTDVVNEATVSNDDHRETETHVVIETQQKEK
LVQDKPKEEDDEILGDDIPNECVLCNDARINCVLVPCGHMWLCYQCGMTV
LKADNGCPACRKPIMKVMRVYLP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030474XLOC_030474Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047889TCONS_00047889Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR0061763-OHacyl-CoA_DH_NAD-bd
IPR013083Znf_RING/FYVE/PHD
IPR016040NAD(P)-bd_dom
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006631fatty acid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:00038573-hydroxyacyl-CoA dehydrogenase activity
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006631 fatty acid metabolic process
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 322..360
e-value: 0.01
score: 25.1
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 322..361
score: 10.601
IPR001841Zinc finger, RING-typeCDDcd00162RINGcoord: 321..364
e-value: 5.00842E-5
score: 39.3512
IPR0061763-hydroxyacyl-CoA dehydrogenase, NAD bindingPFAMPF027373HCDH_Ncoord: 7..181
e-value: 1.1E-33
score: 116.6
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 276..373
e-value: 1.8E-9
score: 36.5
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 320..366
e-value: 2.0E-13
score: 49.9
NoneNo IPR availableGENE3D3.40.50.720coord: 4..184
e-value: 1.7E-30
score: 105.8
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 321..367
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 7..181

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047889-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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