TCONS_00047892-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047892-protein
Unique NameTCONS_00047892-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length275

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047892-protein ID=TCONS_00047892-protein|Name=TCONS_00047892-protein|organism=Clytia hemisphaerica|type=polypeptide|length=275bp
MNSDSLNQNIDYVSSSGHILSVEQKAALQSSLVILKNQQKFKTVEFWGKV
TGTKNEYFIVQGIGTDQIKDRKTLYSLDCIKWGLMPTPNEETRRKCTLIK
GRFTGDPSHEYEHSEKNNDEELNEEEGNMIIVKEEDRLAIVVENICRDVA
IVPRGAFLRTPLGEVIKNKAFEGLSSTEALRLTSYFHFRDPILLHQKTLL
EQADLDKAIDFLDPIVTDIPVDGSWSIQAERGHSLIVIRSLHWLGFTFYH
VPETNSYGYVYFGTGEKNLDLPFML
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030475XLOC_030475Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047892TCONS_00047892Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006802Radial_spoke
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006802Radial spokehead-like proteinPFAMPF04712Radial_spokecoord: 4..121
e-value: 1.3E-8
score: 34.2

Blast
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BLAST of TCONS_00047892-protein vs. Swiss-Prot (Human)
Match: RSPH9 (Radial spoke head protein 9 homolog OS=Homo sapiens GN=RSPH9 PE=1 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 1.886e-100
Identity = 144/277 (51.99%), Postives = 200/277 (72.20%), Query Frame = 0 
Query:    1 MNSDSLNQNIDYVSSSGHILSVEQKAALQSSLVILKNQQKFKTVEFWGKVTGTKNEYFIVQGIGTDQIKDRKTLYSLDCIKWGLMPTPNEETRRKCTLIKGRFTGDPSHEYEHSE--KNNDEELNEEEGNMIIVKEEDRLAIVVENICRDVAIVPRGAFLRTPLGEVIKNKAFEGLSSTEALRLTSYFHFRDPILLHQKTLLEQADLDKAIDFLDPIVTDIPVDGSWSIQAERGHSLIVIRSLHWLGFTFYHVPETNSYGYVYFGTGEKNLDLPFML 275
            M++DSL  +++  S SG  LS +++A+L +SL+++K   ++  V FWG++ G   +Y+I QG+  DQ+  RKTLYSL+C +W L+P   EE   + +++KGRF GDPS+EYEH+E  K N+ E   EE  ++ +KEE RL  V++ I + VAI+PRGA  +TP G    N+ FEGLS +EA +L+SYFHFR+P+ L  KTLLE+ADLD ++DF+D +  DIP  GSWSIQ ERG++L+V+RSL W G TFYH P T +YGYVY GTGEKN+DLPFML
Sbjct:    1 MDADSLLLSLELASGSGQGLSPDRRASLLTSLMLVKRDYRYDRVLFWGRILGLVADYYIAQGLSEDQLAPRKTLYSLNCTEWSLLPPATEEMVAQSSVVKGRFMGDPSYEYEHTELQKVNEGEKVFEEEIVVQIKEETRLVSVIDQIDKAVAIIPRGALFKTPFGPTHVNRTFEGLSLSEAKKLSSYFHFREPVELKNKTLLEKADLDPSLDFMDSLEHDIP-KGSWSIQMERGNALVVLRSLLWPGLTFYHAPRTKNYGYVYVGTGEKNMDLPFML 276
The following BLAST results are available for this feature:
BLAST of TCONS_00047892-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RSPH91.886e-10051.99Radial spoke head protein 9 homolog OS=Homo sapien... [more]
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