TCONS_00047922-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047922-protein
Unique NameTCONS_00047922-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length528

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047922-protein ID=TCONS_00047922-protein|Name=TCONS_00047922-protein|organism=Clytia hemisphaerica|type=polypeptide|length=528bp
MSTESPIPVGVTESKTSPRDAQNMMNLETTDPGQILGSNGILPNSSLLAS
GLALRPGSITPSDSFMIDSQYYNDRIRSLESEKLTIMIEHNNLIKEFNKR
MESHMEEIRSLKDSNIQYETELKDLQELSVFLDDDRKKCRKLAKEWQRFG
RHTVAVMRAEMQGYQDKIKNLEIKQQKLVKENTELRDLCVYLDQQRSGAG
IDGQSNGLNYSVCQECTQLKKEHGTIQRGKSLYNQNITAENFHDLQNQVA
QLEREKDSLHKLLMFGGKSRRDKKRVSFSVPTDEEYDSSSTTSELSDRLD
FPPSFGGSHENFNTISENSLSNVPSILRNGSFPLTMNGRGKLSDISPRNN
DLARLHHNSLYQQNSLNEEEINEIREKLSRSTTGDATLSEREIAVLKDMC
HVASTQSKLRSNSNASNASNSSLNASFDQSPLSPPPALNEVPLYKPAPPA
VATKPAIPSKPAMTSSKEDLLTEDNPQPLNSVTESAESKKPQQTGPPPLP
SYNEIMKDVEDRTPSTAKVEEKESESET
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030491XLOC_030491Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047922TCONS_00047922Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019359CCDC85
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 154..188
NoneNo IPR availableCOILSCoilCoilcoord: 235..262
NoneNo IPR availableCOILSCoilCoilcoord: 87..128
NoneNo IPR availableGENE3D1.10.287.510coord: 91..199
e-value: 2.9E-5
score: 23.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 273..303
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 405..528
IPR019359CCDC85 familyPFAMPF10226CCDC85coord: 74..214
e-value: 8.6E-42
score: 142.9

Blast
[Close]
BLAST of TCONS_00047922-protein vs. Swiss-Prot (Human)
Match: CC85A (Coiled-coil domain-containing protein 85A OS=Homo sapiens GN=CCDC85A PE=2 SV=3)

HSP 1 Score: 142.51 bits (358), Expect = 1.565e-36
Identity = 64/141 (45.39%), Postives = 105/141 (74.47%), Query Frame = 0 
Query:   76 IRSLESEKLTIMIEHNNLIKEFNKRMESHMEEIRSLKDSNIQYETELKDLQELSVFLDDDRKKCRKLAKEWQRFGRHTVAVMRAEMQGYQDKIKNLEIKQQKLVKENTELRDLCVYLDQQRSGAGIDGQSNGLN--YSVCQ 214
            +R  E+EK++ M++H+NLI+E N+R++ H+ EIR LKD N + + + ++L++L  FLDDDR+K +++++EWQR GR+T  VM  E+  Y  K+K+LE+KQ+++VKEN EL++LCV LD+++ GAG  G    ++   S+CQ
Sbjct:   56 LRRAEAEKVSAMLDHSNLIREVNRRLQLHLGEIRGLKDINQKLQEDNQELRDLCCFLDDDRQKGKRVSREWQRLGRYTAGVMHKEVALYLQKLKDLEVKQEEVVKENMELKELCVLLDEEK-GAGCAGSRCSIDSQASLCQ 195
The following BLAST results are available for this feature:
BLAST of TCONS_00047922-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CC85A1.565e-3645.39Coiled-coil domain-containing protein 85A OS=Homo ... [more]
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