TCONS_00047925-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047925-protein
Unique NameTCONS_00047925-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length475

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047925-protein ID=TCONS_00047925-protein|Name=TCONS_00047925-protein|organism=Clytia hemisphaerica|type=polypeptide|length=475bp
SLLLTTWVAIFHVTWSQSLEMTDAFQKNLCHDRWSVMDWQSIIRPCRPYM
QFGTEKRSIEKYRTSPKWSHTLGLDLEKTGVFNKITIQTRTADGHNKQEG
GDTWRVFVRGADRITPSITDLNNGVYETKFIAMQPGHYKAEIVLESTLCE
AFKDPPQDWLKRDSAIIIGDEKNSKLLWEPLRGGNISFKIEQSPKNVTQD
LRQNLKRWKESCGRQYKCDPLLWKGFGRWVNKTWTPYIDDEILEYNNEDG
IESCFKHKEGVFKMVGDEMTQDLSERLKTKDLCKNVFKECIPYKDDTSEK
KNITPQKTFSTAMHLKRLKEMISKPEMGKESGLLLTYGHPFVRNLGFKKY
RTFIDRAAKILKEKYKGKAVWRTISTKWRDSEDPNNHFNNHQRVKLFNAY
ATSAMCNNGIPVLDVFQMSESAPNGDRKSLLKNVEKILTQYYRRNPAKAC
MKRTVNKKKALSSAMLTDITKIGAK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030494XLOC_030494Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047925TCONS_00047925Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001298Filamin/ABP280_rpt
IPR013783Ig-like_fold
IPR014756Ig_E-set
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001298Filamin/ABP280 repeatSMARTSM00557flmn_3coord: 65..193
e-value: 0.0025
score: 15.5
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 82..399
e-value: 3.7E-10
score: 39.4
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 70..145

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047925-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top