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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00048163-protein ID=TCONS_00048163-protein|Name=TCONS_00048163-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1487bp
LSAKKMGVTREIVLLLIAFFTCFYLTNATELRLDGRNVCPFDHIDQVQVP
QRVFVRWVYYCGDQAYRYRWSIGYIICSRTRKSRRGLYRIRYVTEEHVTK
IPECCEGWAQVGDECTRAICARRCIRGSCTAPNTCTCPSGWTGPVCKSDI
NECNINKGGCVNAYCRNRRGYHYCQCYQNHRRSRNNRLVCERIDVCAENK
NACKCPDYSRSRTPVAVPCSVTCQNKNNGYNCVCSKGYYKKKSHDRTCQD
FNECSRNKGGCSNFCHNTPGSFYCACPPGYQLDTDKKTCIDKNECLVQNG
GCEHECKNTDGSYQCLCKKGFILDGNNHTCSDHDECGTSSHGCQHHCENF
HGSYQCACAKGFQLNADNKTCSDTNECEVRNVTTISPITNQTITKEISLA
GCEQKCNNLNGSFNCSCDSGYKLNEDGISCDNLDECDLGTHNCQQLCLDI
PGSFECECRLGYEVNKLSPNLCIAKQCNPLNALQNGNSTCLSGGTDDKCT
VTCNEGFTLQGSQIRTCQFDGTWSGVQTTCKRRDCPELVPPSFGHITLPC
SQLFNSSCKITCDEGLVLNGNKMTKCIVGNDGRMEWTNPTPNCTARGPCN
PSPCLHQTKCSAPTNTTYKCDCEGSVYTGKNCQIRKIETDESMLLLTSVA
DDQTLKLTTATNGRELHIKAIASSSNLKVDPTEIKFLGKNTEFVLTVKAS
KPGFYNLTFEFTNGNDSQKFSLPSPIAVISGGYKNKSAGNIVNDQGLIKP
GCYSIEVYGYRYVSNKPFVDQATRGVIQRRLEDGTLLPLSATGGKIDKTG
RFISYPLLSLSQLMHEENNNIIDSGTCVSGGRQLNVTSQIILTNAFTYSV
FNVFNKQSPYWIFVNAPTSDDQNIHDDLHARLVVGAQVDKDCMKKLELEE
NALYYQYITYQPLEIVVPSGITRLNETVKKCFLQSTSDDQLMAFSVAQED
DQETKAFDGLLKFLLRQQDNIMVDQIGFINGKENIRHFFTSGTQSFNAFQ
KNISKADVTVTGIQLWDTFQFPDVGTFRMKSGGQVKATVRSFTSSSTPPL
EAVFTGQLSEATFTNNTFNVKFTNDKSKLIQPDKLLFFDEDEPVSLNIDY
KREDTKYKIDFPPLLDMGGLVKELQTASTAIATESLDTFIRISKSLSEIL
SLNSGSLETRSKQFLRYLNMRREMQVILSELNFSDALYKPLNDFIEIAAN
AESQITHKVVSFDQRQATINEYEILGTGKICISDSYCFNSHNLLITFNKD
GVKCVDFNGQNLTTFTKVVATMKTTETIESIIDLPTGSELEICFKPDILK
NTYQMQSQRAVWEFYDTKVEHTKFQIRGGELFLNVNKAFDMEPLGTIKSL
SGQSSFTSLIKGDDTAMNINGRSTNTSLEMSIIQEVEKQLRDENTTYQLR
RQHLEEDLSKAVNMIITLKNAMSKKQNEVEGPEASLLNVLQNITKYHNVV
NQTRNEVNDLLKGSQQLKSEFNEKCQPKTCELYTCVP Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005509 | calcium ion binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005509 |
calcium ion binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 1387..1407 |
| None | No IPR available | COILS | Coil | Coil | coord: 1450..1470 |
| None | No IPR available | GENE3D | 2.10.25.10 | | coord: 355..373
e-value: 6.8E-12
score: 44.5
coord: 314..332
e-value: 1.1E-11
score: 44.0
coord: 273..291
e-value: 2.0E-13
score: 49.5 |
| None | No IPR available | GENE3D | 2.10.70.10 | | coord: 540..595
e-value: 5.9E-9
score: 35.9 |
| None | No IPR available | GENE3D | 2.10.25.10 | | coord: 333..354
e-value: 5.2E-7
score: 29.1
coord: 292..313
e-value: 2.8E-9
score: 36.4
coord: 252..272
e-value: 5.9E-10
score: 38.6 |
| None | No IPR available | GENE3D | 2.40.490.10 | | coord: 153..195
e-value: 3.1E-6
score: 26.6 |
| None | No IPR available | GENE3D | 2.10.25.10 | | coord: 196..227
e-value: 0.01
score: 15.2 |
| None | No IPR available | GENE3D | 2.10.25.10 | | coord: 374..409
e-value: 3.3E-5
score: 23.2 |
| None | No IPR available | PFAM | PF14670 | FXa_inhibition | coord: 254..289
e-value: 2.6E-12
score: 46.7 |
| None | No IPR available | GENE3D | 2.10.25.10 | | coord: 410..437
e-value: 1.8E-11
score: 43.6
coord: 228..251
e-value: 2.3E-6
score: 27.3 |
| None | No IPR available | GENE3D | 2.10.70.10 | | coord: 507..539
e-value: 1.8E-9
score: 37.1 |
| None | No IPR available | GENE3D | 2.10.25.10 | | coord: 113..152
e-value: 2.1E-5
score: 24.1 |
| None | No IPR available | GENE3D | 2.10.25.10 | | coord: 597..636
e-value: 8.4E-4
score: 19.0 |
| None | No IPR available | GENE3D | 2.10.70.10 | | coord: 486..506
e-value: 4.3E-4
score: 20.1 |
| None | No IPR available | GENE3D | 2.10.25.10 | | coord: 438..485
e-value: 5.5E-9
score: 35.6 |
| IPR001881 | EGF-like calcium-binding domain | SMART | SM00179 | egfca_6 | coord: 250..290
e-value: 3.7E-11
score: 53.1
coord: 373..431
e-value: 5.2E-4
score: 28.3
coord: 199..249
e-value: 0.0017
score: 24.1
coord: 291..331
e-value: 2.3E-7
score: 40.5
coord: 149..191
e-value: 0.0017
score: 24.1
coord: 332..372
e-value: 6.8E-9
score: 45.5
coord: 432..473
e-value: 1.5E-7
score: 41.1 |
| IPR001881 | EGF-like calcium-binding domain | PFAM | PF07645 | EGF_CA | coord: 403..430
e-value: 2.6E-4
score: 21.0
coord: 433..466
e-value: 8.9E-7
score: 28.9
coord: 291..330
e-value: 1.2E-4
score: 22.0
coord: 332..371
e-value: 1.7E-7
score: 31.2 |
| IPR000436 | Sushi/SCR/CCP domain | SMART | SM00032 | CCP_2 | coord: 477..530
e-value: 2.0E-9
score: 47.3
coord: 535..593
e-value: 1.1E-6
score: 38.2 |
| IPR000436 | Sushi/SCR/CCP domain | PFAM | PF00084 | Sushi | coord: 477..530
e-value: 2.3E-6
score: 28.0 |
| IPR000436 | Sushi/SCR/CCP domain | PROSITE | PS50923 | SUSHI | coord: 475..532
score: 9.121 |
| IPR000436 | Sushi/SCR/CCP domain | PROSITE | PS50923 | SUSHI | coord: 533..595
score: 8.085 |
| IPR000436 | Sushi/SCR/CCP domain | CDD | cd00033 | CCP | coord: 535..593
e-value: 1.05544E-5
score: 43.9908 |
| IPR000436 | Sushi/SCR/CCP domain | CDD | cd00033 | CCP | coord: 477..531
e-value: 8.07732E-11
score: 59.0136 |
| IPR000436 | Sushi/SCR/CCP domain | SUPERFAMILY | 57535 | Complement control module/SCR domain | coord: 476..544 |
| IPR000436 | Sushi/SCR/CCP domain | SUPERFAMILY | 57535 | Complement control module/SCR domain | coord: 529..594 |
| IPR000742 | EGF-like domain | SMART | SM00181 | egf_5 | coord: 253..290
e-value: 1.3E-6
score: 38.0
coord: 476..518
e-value: 180.0
score: 1.7
coord: 335..372
e-value: 2.7E-4
score: 30.3
coord: 152..191
e-value: 110.0
score: 3.9
coord: 202..249
e-value: 7.2
score: 15.6
coord: 294..331
e-value: 1.8E-4
score: 30.8
coord: 598..633
e-value: 15.0
score: 14.1
coord: 435..473
e-value: 0.012
score: 24.8
coord: 376..431
e-value: 1.4
score: 17.9
coord: 114..147
e-value: 0.6
score: 19.2 |
| IPR000742 | EGF-like domain | PROSITE | PS50026 | EGF_3 | coord: 111..147
score: 8.349 |
| IPR000742 | EGF-like domain | PROSITE | PS50026 | EGF_3 | coord: 432..468
score: 7.451 |
| IPR000742 | EGF-like domain | PROSITE | PS50026 | EGF_3 | coord: 595..633
score: 12.753 |
| IPR000742 | EGF-like domain | PROSITE | PS50026 | EGF_3 | coord: 250..290
score: 10.128 |
| IPR000742 | EGF-like domain | PROSITE | PS50026 | EGF_3 | coord: 332..372
score: 8.689 |
| IPR000742 | EGF-like domain | PROSITE | PS50026 | EGF_3 | coord: 291..331
score: 7.881 |
| IPR000152 | EGF-type aspartate/asparagine hydroxylation site | PROSITE | PS00010 | ASX_HYDROXYL | coord: 347..358 |
| IPR000152 | EGF-type aspartate/asparagine hydroxylation site | PROSITE | PS00010 | ASX_HYDROXYL | coord: 447..458 |
| IPR000152 | EGF-type aspartate/asparagine hydroxylation site | PROSITE | PS00010 | ASX_HYDROXYL | coord: 265..276 |
| IPR000152 | EGF-type aspartate/asparagine hydroxylation site | PROSITE | PS00010 | ASX_HYDROXYL | coord: 306..317 |
| IPR013032 | EGF-like, conserved site | PROSITE | PS01186 | EGF_2 | coord: 274..289 |
| IPR013032 | EGF-like, conserved site | PROSITE | PS01186 | EGF_2 | coord: 315..330 |
| IPR013032 | EGF-like, conserved site | PROSITE | PS01186 | EGF_2 | coord: 135..146 |
| IPR013032 | EGF-like, conserved site | PROSITE | PS00022 | EGF_1 | coord: 135..146 |
| IPR013032 | EGF-like, conserved site | PROSITE | PS01186 | EGF_2 | coord: 356..371 |
| IPR018097 | EGF-like calcium-binding, conserved site | PROSITE | PS01187 | EGF_CA | coord: 432..456 |
| IPR018097 | EGF-like calcium-binding, conserved site | PROSITE | PS01187 | EGF_CA | coord: 291..315 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 103..249 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 248..373 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 398..477 |
Blast
BLAST of TCONS_00048163-protein vs. Swiss-Prot (Human)
Match: MATN2 (Matrilin-2 OS=Homo sapiens GN=MATN2 PE=1 SV=4) HSP 1 Score: 188.348 bits (477), Expect = 2.075e-48 Identity = 163/570 (28.60%), Postives = 236/570 (41.40%), Query Frame = 0
Query: 219 CSVTCQNKNNGYNCVCSKGYYKKKSHDRTCQDFNECSRNKGGCSNFCHNTPGSFYCACPPGYQLDTDKKTCIDKNECLVQNGGCEHECKNTDGSYQCLCKKGFILDGNNHTCSDHDECGTSSHGCQHHCENFHGSYQCACAKGFQLNADNKTCSDTNECEVRNVTTISPITNQTITKEISLAGCEQKCNNLNGSFNCSCDSGYKLNEDGISCDNLDECDLGTHNCQQLCLDIPGSFECECRLGYEVNK------------LSPNLC----------IAKQCNPLNALQNGNSTCLSGGT----DDKCTVTC---NEGFTLQGSQIRTCQFDGTWSGVQTTCKRRDCPELVPPSFGHITLPCSQLFNSSCKITCDEGLVLNGNKMTKCIVGNDGRMEWTNPTPNCTARGPCNPSPCLHQTKCSAPTNTTYKCDC-EGSVYT--GKNCQ---------IRKIETDESM---------LLLTSVADDQTLKLTTATNG---------RELHIKAIASSSNLKVDPTEIKFLGKNTEFVLTVKASKPGFYNLTFEFTNGNDSQKFSLPSPIAVI 729
C+ C N Y C C +GY S TC+ + C+ C C N PGSF C C GY L D K C+ + C +N GCEHEC N DGSY C C +GF L+ + TC+ D C +S+HGCQH C N SY C C KGF LN D KTC N C + GCE +C N+ S+ C C GY L+ +G +C +D C H C+QLCL+ SF C+C G+ +N+ LS + C A QC + L++ TC + D C +C + F Q + + DG TC+R+D + + HI + NS TC+ L G ++ + DG+ C + C + + C N +Y C C EG V G+ C+ + I+ +S+ +T + D T+ A G E ++ S+ ++K +K++GK + L +K + FT G ++ S P A I
Sbjct: 249 CAHFCINIPGSYVCRCKQGYILN-SDQTTCRIQDLCAMEDHNCEQLCVNVPGSFVCQCYSGYALAEDGKRCVAVDYCASENHGCEHECVNADGSYLCQCHEGFALNPDKKTCTKIDYCASSNHGCQHECVNTDDSYSCHCLKGFTLNPDKKTCRRINYCALNK------------------PGCEHECVNMEESYYCRCHRGYTLDPNGKTCSRVDHCAQQDHGCEQLCLNTEDSFVCQCSEGFLINEDLKTCSRVDYCLLSDHGCEYSCVNMDRSFACQCPEGHVLRSDGKTCAKLDSCALGDHGCEHSCVSSEDSFVCQCFEGYILREDG------KTCRRKDVCQAIDHGCEHICV------NSDDSYTCE---CLEGFRLAE-----DGK--------RCRRKDVCKSTHHGCEHICVNNGN-SYICKCSEGFVLAEDGRRCKKCTEGPIDLVFVIDGSKSLGEENFEVVKQFVTGIIDSLTISPKAARVGLLQYSTQVHTEFTLRNFNSAKDMKKAVAHMKYMGKGSMTGLALK------HMFERSFTQGEGARPLSTRVPRAAI 764 HSP 2 Score: 186.037 bits (471), Expect = 9.050e-48 Identity = 147/470 (31.28%), Postives = 199/470 (42.34%), Query Frame = 0
Query: 120 CARRCIRGSCTAPNTCTCPSGWTGPVCKSDINECNINKGGCVNAY-----CRNRRGYHYCQCYQNHRRSRNNRLVCERIDVCAENKNACKCPDYSRSRTPVAVPCSVTCQNKNNGYNCVCSKGYYKKKSHDRTCQDFNECSRNKGGCSNFCHNTPGSFYCACPPGYQLDTDKKTCIDKNECLVQNGGCEHECKNTDGSYQCLCKKGFILDGNNHTCSDHDECGTSSHGCQHHCENFHGSYQCACAKGFQLNADNKTCSDTNECEVRNVTTISPITNQTITKEISLAGCEQKCNNLNGSFNCSCDSGYKLNEDGISCDNLDECDLGTHNCQQLCLDIPGSFECECRLGYEVNKLSPNLCIAKQCNPLNALQNGNSTC--LSGGTDDKCTVTCNEGFTLQGSQIRTCQFDGTWSGVQTTCKRRDCPELVPPSFGHITLPCSQLFNSS-CKITCDEGLVL--NGNKMTKCIVG 579
CA CI + C C G+ + SD C I + + C N G CQCY + + + + C +D CA + C+ C N + Y C C +G+ +TC + C+ + GC + C NT S+ C C G+ L+ DKKTC N C + GCEHEC N + SY C C +G+ LD N TCS D C HGC+ C N S+ C C++GF +N D KTCS + C +S GCE C N++ SF C C G+ L DG +C LD C LG H C+ C+ SF C+C GY + + K C + Q + C + +DD T C EGF L R C+R+D + HI C NS CK C EG VL +G + KC G
Sbjct: 249 CAHFCI--NIPGSYVCRCKQGY---ILNSDQTTCRIQDLCAMEDHNCEQLCVNVPGSFVCQCYSGYALAEDGKR-CVAVDYCASENHGCE----------------HECVNADGSYLCQCHEGFALNPD-KKTCTKIDYCASSNHGCQHECVNTDDSYSCHCLKGFTLNPDKKTCRRINYCALNKPGCEHECVNMEESYYCRCHRGYTLDPNGKTCSRVDHCAQQDHGCEQLCLNTEDSFVCQCSEGFLINEDLKTCSRVDYC------------------LLSDHGCEYSCVNMDRSFACQCPEGHVLRSDGKTCAKLDSCALGDHGCEHSCVSSEDSFVCQCFEGYILRE------DGKTCRRKDVCQAIDHGCEHICVNSDDSYTCECLEGFRLAEDGKR--------------CRRKDVCKSTHHGCEHI---CVNNGNSYICK--CSEGFVLAEDGRRCKKCTEG 652
The following BLAST results are available for this feature:
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