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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00048236-protein ID=TCONS_00048236-protein|Name=TCONS_00048236-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1363bp
MNSREQQRNSPLPLKNMGQNICFFNSVLQALFSLDGFREYIFNLVTDSSP
QLVIKELFTSMKFSDIPIETDRLMPSIQLLHYNHQLREQYDAEECLRHLI
NTVYTSTLDNNSISENNIFRLSFTESILCQNCLIPSEQTLEDITCHIEFP
NPFNNYSIXNNIFRLSFTESILCQNCLIPSEQTLEDITCHIEFPNPFNNH
SIENEISKLVNDPHGNFMDELYDCNVCPFRTNATKNKTLFHVSDYLIIQL
SIFKFDRKTLATGKIAPNLNVELQFHNILLGTLDLNAIVFHHGQSPNTGH
YTAAIKHGEVWYSANDNKIEPIPNPFFRCYVNDKVVPYLLIYKKSKNVIV
TTPEPVSSLKDDCEQADFVIEFSKRKEVREDNGSKNFSMKLATSPSSKHS
NTEMVSKSKNYQKDRTERSLKKECDLYGVPFLPPFDNETTTAVRKRRKIM
RSEIKQKKRKVEIREDLISNSNIPLTIESCQTFSKKNTINDQSKNQANLG
ETSKPHLTVHTLPHNPNFKTHSINSQSDYSHIPKKFRKSRLPLKNLLERP
VIKLFYPNKHENKNDHENSITNRDQNLSSQHNEMKNTKNQIKAKYKTDYN
KQHSEKNKISQTRDNEISEIISKMIDDVVETGVLSTTENVTDPSSEVHDN
PEVFKTIQKFEEGEMSHKLVKCTVCQEINPLFHVSFENKDNRLVNINNVK
LNKNNVCQKCLVDKRKWKPKKPKGKNSEDNNISKGKISSPNNNQELRAAK
WSGIDSPESDLGPKNDIIRHNNMHFGPIPDPLKNLTTVELALISKITVCM
RVHMLRHGMMSSKGHSVSIPQRMSIATQLPKLPEEVCIVVLKRRGKKQQK
SKHYTVKRKAVENALKCLCFGIPNGGYNTSAANTRKYDGPDHKNMRLTNK
YFVHFPNPYYNNVEIMVERLNDLPTERKMYSGLKTVFMENDIPENEKGPA
PAQFEVPFSAEDESYTSSSIILPAEPKDVSEEIKTIVKNVTGSEDIANTF
ALADWKYADEEPLSELKTPGFFAQAFPSIFTGATCDFTHKPLVTVGLDEW
IKHIYFQKDNRVSKHPFLKFFLYNLSLRKKALNNGNFLVAQQLTDSHISI
EELQERFNNNDHSIPKKIIRMGSNLVNSDPYWNRCKRELDALLFFRRYSI
GDLPSYFHTNSMAELHWAPLRQLLAKYLSSTCEDTYDSILNKLNTDMHFL
RRTVLQNLHIATLYFESRTINYYNTVAKELFDLTDYWFRFEFAKSRGQIH
SHGLIFAETHAKNIEQALDINGPSSDQEKAQALYRWLQTHEEDSIGIFSP
GFVSMHPAGGSQVTAEDESQVWIPNKEKWPKPEGTQDPPKIDPLNLIMSD
YCTTPEKVRELYL Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016579 | protein deubiquitination |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0036459 | thiol-dependent ubiquitinyl hydrolase activity |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0016579 |
protein deubiquitination |
| molecular_function |
GO:0036459 |
thiol-dependent ubiquitinyl hydrolase activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR001394 | Peptidase C19, ubiquitin carboxyl-terminal hydrolase | PFAM | PF00443 | UCH | coord: 14..342
e-value: 3.5E-17
score: 62.6 |
| IPR025476 | Helitron helicase-like domain | PFAM | PF14214 | Helitron_like_N | coord: 1060..1255
e-value: 3.3E-9
score: 37.1 |
| None | No IPR available | GENE3D | 3.90.70.10 | | coord: 5..347
e-value: 2.7E-36
score: 124.4 |
| None | No IPR available | CDD | cd02257 | Peptidase_C19 | coord: 14..343
e-value: 4.12554E-18
score: 84.457 |
| None | No IPR available | SUPERFAMILY | 54001 | Cysteine proteinases | coord: 14..344 |
| IPR028889 | Ubiquitin specific protease domain | PROSITE | PS50235 | USP_3 | coord: 12..345
score: 27.972 |
Blast
The following BLAST results are available for this feature:
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