TCONS_00048294-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00048294-protein
Unique NameTCONS_00048294-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length490

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00048294-protein ID=TCONS_00048294-protein|Name=TCONS_00048294-protein|organism=Clytia hemisphaerica|type=polypeptide|length=490bp
MCYRRVLRKQAFLFIFILFVALWFFIKSRNFVTVDNESNMYSNSIDDSKE
TDLELARLSKIEAEKEAVRNEQLAELEHQEMMRKREESLKQQTIEDDPFH
PKHNIEREYTDFSNFKINFTQTNYKPADLREAVRKLNDEQLIYNKEMLKK
LPKDYIVMVVQVHKRVEYFKELLDSMQRAKDIGSTLLVVSHDYYTDEMNA
LIRMIKFCPVVQIFFPFSLQLYPNEFPGPSPNDCPRDIKKPDARAKGCIN
AETPDMYGHYREAPIVMIKHHWWWKINHVMDNLDQTKKHNGPFLFIEEDH
YLAPSFVHALRTLGNFKKSDARCAGSCEIMTLGTYNNKQNFQTEGKRVMR
GQWISSQHNMGMAMYRNTWNDLKKCSEKFCAYDDYNWDWTLMHLSKHCLR
KQLFVLLYEVPRIFHVGDCGLHHKKKCSSTKDTLNKIKGILERNKDYLYS
DRIEPYDKHATLTLKPNGGWGDSRDHELCMRYTKGNEPLK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030738XLOC_030738Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00048294TCONS_00048294Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029044Nucleotide-diphossugar_trans
IPR007754GlcNAc_II
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0005795Golgi stack
Vocabulary: Molecular Function
TermDefinition
GO:0008455alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009312oligosaccharide biosynthetic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009312 oligosaccharide biosynthetic process
cellular_component GO:0005795 Golgi stack
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 156..431
e-value: 1.6E-14
score: 53.5
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 269..434
coord: 156..225
IPR007754N-acetylglucosaminyltransferase IIPFAMPF05060MGAT2coord: 130..479
e-value: 1.4E-139
score: 464.9

Blast
[Close]
BLAST of TCONS_00048294-protein vs. Swiss-Prot (Human)
Match: MGAT2 (Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase OS=Homo sapiens GN=MGAT2 PE=1 SV=1)

HSP 1 Score: 357.066 bits (915), Expect = 2.682e-119
Identity = 162/358 (45.25%), Postives = 232/358 (64.80%), Query Frame = 0 
Query:  130 REAVRKLNDEQLIYNKEMLKKLPKDYIVMVVQVHKRVEYFKELLDSMQRAKDIGSTLLVVSHDYYTDEMNALIRMIKFCPVVQIFFPFSLQLYPNEFPGPSPNDCPRDIKKPDARAKGCINAETPDMYGHYREAPIVMIKHHWWWKINHVMDNLDQTKKHNGPFLFIEEDHYLAPSFVHALRTLGNFKKSDARCAGSCEIMTLGTYNNKQNFQTEGKRVMRGQWISSQHNMGMAMYRNTWNDLKKCSEKFCAYDDYNWDWTLMHLSKHCLRKQLFVLLYEVPRIFHVGDCGLHHKKKCSSTKDTLNKIKGILERNKDYLYSDRIEPYDKHATLTLKP---NGGWGDSRDHELCMRYTK 484
            R  V +LN +Q + N +         +V+VVQVH R EY + LLDS+++A+ I + L++ SHD+++ E+N LI  + FCPV+Q+FFPFS+QLYPNEFPG  P DCPRD+ K  A   GCINAE PD +GHYREA     KHHWWWK++ V + +   + + G  LF+EEDHYLAP F H  + +   K+ +      C++++LGTY+  ++F     +V    W S++HNMG+A+ RN +  L +C++ FC YDDYNWDWTL +L+  CL K   VL+ ++PRIFH GDCG+HHKK C  +  +  +I+ +L  NK Y++ + +   +K   + + P   NGGWGD RDHELC  Y +
Sbjct:   92 RSLVYQLNFDQTLRNVDKAGTWAPRELVLVVQVHNRPEYLRLLLDSLRKAQGIDNVLVIFSHDFWSTEINQLIAGVNFCPVLQVFFPFSIQLYPNEFPGSDPRDCPRDLPKNAALKLGCINAEYPDSFGHYREAKFSQTKHHWWWKLHFVWERVKILRDYAGLILFLEEDHYLAPDFYHVFKKMWKLKQQE---CPECDVLSLGTYSASRSFYGMADKVDVKTWKSTEHNMGLALTRNAYQKLIECTDTFCTYDDYNWDWTLQYLTVSCLPKFWKVLVPQIPRIFHAGDCGMHHKKTCRPSTQS-AQIESLLNNNKQYMFPETLTISEKFTVVAISPPRKNGGWGDIRDHELCKSYRR 445
The following BLAST results are available for this feature:
BLAST of TCONS_00048294-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MGAT22.682e-11945.25Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglu... [more]
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