TCONS_00048820-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00048820-protein
Unique NameTCONS_00048820-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length281

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00048820-protein ID=TCONS_00048820-protein|Name=TCONS_00048820-protein|organism=Clytia hemisphaerica|type=polypeptide|length=281bp
MSVKKEENSRHEFATFLVSTQDRDEGLGLCTWLLTLAAMLLVICTFPISL
FFCIKIVQEYERAVIFRLGRLLAGEAKGPGIFFVLPCIDTYMKVDLRVIS
FDVPPQEILTKDSVTVAVDAVVYFRISNPVWSVVNVEDAHRSTKLLAQTT
LRNELGTKNLSDLLLQRETISESIARILDVATDPWGMKVERVEVKDVRLP
QQLQRAMAAEAEASREARAKVIAAEGEMNAAKALKEAAEVIQESPQALQL
RYLQTLQTISAEKNSTIIFPLPIDMLNKALS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031034XLOC_031034Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00048820TCONS_00048820Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001972Stomatin_fam
IPR001107Band_7
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001972Stomatin familyPRINTSPR00721STOMATINcoord: 163..186
score: 44.64
coord: 108..129
score: 66.56
coord: 59..81
score: 65.53
coord: 187..205
score: 67.67
coord: 231..254
score: 65.77
coord: 143..160
score: 69.44
coord: 206..227
score: 81.17
IPR001107Band 7 domainSMARTSM00244PHB_4coord: 52..211
e-value: 2.7E-62
score: 222.9
IPR001107Band 7 domainPFAMPF01145Band_7coord: 56..227
e-value: 2.9E-29
score: 102.3
IPR001107Band 7 domainSUPERFAMILY117892Band 7/SPFH domaincoord: 85..218

Blast
[Close]
BLAST of TCONS_00048820-protein vs. Swiss-Prot (Human)
Match: STOM (Erythrocyte band 7 integral membrane protein OS=Homo sapiens GN=STOM PE=1 SV=3)

HSP 1 Score: 343.199 bits (879), Expect = 2.410e-119
Identity = 175/252 (69.44%), Postives = 213/252 (84.52%), Query Frame = 0 
Query:   25 EGLGLCTWLLTLAAMLLVICTFPISLFFCIKIVQEYERAVIFRLGRLLAGEAKGPGIFFVLPCIDTYMKVDLRVISFDVPPQEILTKDSVTVAVDAVVYFRISNPVWSVVNVEDAHRSTKLLAQTTLRNELGTKNLSDLLLQRETISESIARILDVATDPWGMKVERVEVKDVRLPQQLQRAMAAEAEASREARAKVIAAEGEMNAAKALKEAAEVIQESPQALQLRYLQTLQTISAEKNSTIIFPLPIDML 276
            +GLG C W+L   + L  + TFPIS++ CIKI++EYERA+IFRLGR+L G AKGPG+FF+LPC D+++KVD+R ISFD+PPQEILTKDSVT++VD VVY+R+ N   +V N+ +A  +T+LLAQTTLRN LGTKNLS +L  RE I+ ++   LD ATD WG+KVERVE+KDV+LP QLQRAMAAEAEASREARAKVIAAEGEMNA++ALKEA+ VI ESP ALQLRYLQTL TI+AEKNSTI+FPLPIDML
Sbjct:   25 KGLGPCGWILVAFSFLFTVITFPISIWMCIKIIKEYERAIIFRLGRILQGGAKGPGLFFILPCTDSFIKVDMRTISFDIPPQEILTKDSVTISVDGVVYYRVQNATLAVANITNADSATRLLAQTTLRNVLGTKNLSQILSDREEIAHNMQSTLDDATDAWGIKVERVEIKDVKLPVQLQRAMAAEAEASREARAKVIAAEGEMNASRALKEASMVITESPAALQLRYLQTLTTIAAEKNSTIVFPLPIDML 276
The following BLAST results are available for this feature:
BLAST of TCONS_00048820-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
STOM2.410e-11969.44Erythrocyte band 7 integral membrane protein OS=Ho... [more]
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