TCONS_00048962-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00048962-protein
Unique Name	TCONS_00048962-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	282

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00048962-protein ID=TCONS_00048962-protein|Name=TCONS_00048962-protein|organism=Clytia hemisphaerica|type=polypeptide|length=282bp
NDKGLKNRFVFEIMTSQFVGKCFCMITGASAGFGQALAQLMVKEGGLLSQ
AVNGSKIVLLSRNVSGMKQTRTAMEEKGYDMSRFDVEVVSIDLSDTGNTE
GKTLEYLKKQSKEYDNLILFNNAGVLGDVTSTAVDKTHPIQDYQNLFNVN
MVSPVFLITNVCQHFSTSKRTIVQTSSIAAKQALNCMSTYCSAKAGMDMF
MKCLTKDHPDITTLSYSPGPMDTAIGNDLRLNHKVESVRESWEEMKEKGT
IVNPYDSATKLLEVLQTGFKSGDFVDVFGRTG

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_031108	XLOC_031108	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00048962	TCONS_00048962	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002347	SDR_fam
IPR016040	NAD(P)-bd_dom

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00081	GDHRDH	coord: 114..125 score: 40.4 coord: 164..180 score: 23.29 coord: 190..209 score: 24.95 coord: 209..226 score: 25.27 coord: 23..40 score: 37.37
IPR002347	Short-chain dehydrogenase/reductase SDR	PFAM	PF00106	adh_short	coord: 25..230 e-value: 6.0E-26 score: 91.0
None	No IPR available	GENE3D	3.40.50.720		coord: 20..279 e-value: 1.3E-32 score: 112.6
IPR016040	NAD(P)-binding domain	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 24..268

Blast

[Close]

BLAST of TCONS_00048962-protein vs. Swiss-Prot (Human)
Match: SPRE (Sepiapterin reductase OS=Homo sapiens GN=SPR PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 3.782e-34
Identity = 91/266 (34.21%), Postives = 138/266 (51.88%), Query Frame = 0

Query:   19 VGKCFCMITGASAGFGQALAQLMVKEGGLLSQAVNGSKIVLLSRNVSGMKQTRTAMEEKGYDMSRFDVEVVSIDLSDTGNTEGKTLEYLKK--QSKEYDNLILFNNAGVLGDVTSTAVDKTHPIQDYQNLFNVNMVSPVFLITNVCQHFSTSK---RTIVQTSSIAAKQALNCMSTYCSAKAGMDMFMKCLTKDHPDITTLSYSPGPMDTAIGNDLRLNHKVESVRESWEEMKEKGTIVNPYDSATKLLEVLQTG-FKSGDFVDVF 278
            +G+  C++TGAS GFG+ LA L+       S    GS +VL +RN   ++Q      E G + S   V  V  DL      + + L  L++  + K    L+L NNAG LGDV+   VD +   Q   N + +N+ S + L ++V + F  S    RT+V  SS+ A Q     + YC+ KA  DM  + L  + P++  L+Y+PGP+DT +    R       +R+  +E+K KG +V+   SA KLL +L+   FKSG  VD +
Sbjct:    5 LGRAVCLLTGASRGFGRTLAPLLA------SLLSPGSVLVLSARNDEALRQLEA---ELGAERSGLRVVRVPADLGAEAGLQ-QLLGALRELPRPKGLQRLLLINNAGSLGDVSKGFVDLSDSTQ-VNNYWALNLTSMLCLTSSVLKAFPDSPGLNRTVVNISSLCALQPFKGWALYCAGKAARDMLFQVLALEEPNVRVLNYAPGPLDTDMQQLARETSVDPDMRKGLQELKAKGKLVDCKVSAQKLLSLLEKDEFKSGAHVDFY 259

The following BLAST results are available for this feature:

BLAST of TCONS_00048962-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00048962-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SPRE	3.782e-34	34.21	Sepiapterin reductase OS=Homo sapiens GN=SPR PE=1 ...	[more]

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TCONS_00048962-protein (polypeptide) - C. hemisphaerica