TCONS_00049070-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049070-protein
Unique NameTCONS_00049070-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length223

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049070-protein ID=TCONS_00049070-protein|Name=TCONS_00049070-protein|organism=Clytia hemisphaerica|type=polypeptide|length=223bp
LIQLSNLLQICGHDNKERIGQVNIKIAESAFEHKDYTYAGIVCVQLVDDN
YSNAWYICRKLGECAKYTNFTIRQKLLSFALPYCPVHHIEEVLQEKTQLE
TQVLYERLGVFTKEGKKDKIVTSSKKETEEENNEDNVDGNNISILNKTKT
TTKKLISSVASVADNCWVGSAMNWVKPSSEGSGNQVDVVEREIESVRHNP
FYSSLDSKKIDEDVQRFNVSNRT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031180XLOC_031180Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049070TCONS_00049070Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..142

Blast
[Close]
BLAST of TCONS_00049070-protein vs. Swiss-Prot (Human)
Match: NBAS (Neuroblastoma-amplified sequence OS=Homo sapiens GN=NBAS PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 4.282e-27
Identity = 65/223 (29.15%), Postives = 111/223 (49.78%), Query Frame = 0 
Query:    1 LIQLSNLLQICGHDNKERIGQVNIKIAESAFEHKDYTYAGIVCVQLVDDNYSNAWYICRKLGECAKYTNFTIRQKLLSFALPYCPVHHIEEVLQEKTQLETQVLYERLGVFTKEGKKDKIVTSSKKETEEENNEDNVDGNN------------ISILNKTKTTTKKLISSVASVADNCWVGSAMNWVKPSSE---GSGNQVDVVERE-IESVRHNPFYSSLDS 207
            L+ L+ LL++ G + +ER GQV I + E A    DY  A + C +L+   Y  +W +C +LG+   Y +   RQ+L++FAL +CP   IE +L   + L+T++LY+R+         + I  S       + +E  V G+N            + +L+ T TTTK ++    +V+D  W   ++ +++P      G   Q+     E +E    +PFY S+ S
Sbjct: 1262 LLGLAELLRVAGENPEERRGQVLILLVEQALRFHDYKAASMHCQELMATGYPKSWDVCSQLGQSEGYQDLATRQELMAFALTHCPPSSIELLLAASSSLQTEILYQRVNFQIHHEGGENISASPLTSKAVQEDEVGVPGSNSADLLRWTTATTMKVLSNTTTTTKAVLQ---AVSDGQWWKKSLTYLRPLQGQKCGGAYQIGTTANEDLEKQGCHPFYESVIS 1481
The following BLAST results are available for this feature:
BLAST of TCONS_00049070-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NBAS4.282e-2729.15Neuroblastoma-amplified sequence OS=Homo sapiens G... [more]
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