TCONS_00049268-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049268-protein
Unique NameTCONS_00049268-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length170

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049268-protein ID=TCONS_00049268-protein|Name=TCONS_00049268-protein|organism=Clytia hemisphaerica|type=polypeptide|length=170bp
MAFTYRMDGVKTFVRFFEKYKEGFGKPPEDYYLGNENLHQLTKSGEYELY
YLTDARDTPTTYHGWYGQFSVSDEADFYRLSIGDFREGTNTLAISDSMQF
SAHEVGKDKAGAFCALNRQGGFWYNACGSMFPHSKANGIRPPGECMGLYP
GNSLGMVCTKTFQIFMRKKR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031275XLOC_031275Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049268TCONS_00049268Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
IPR014715Fibrinogen_a/b/g_C_2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 1..164
e-value: 2.5E-11
score: 13.8
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 3..130
e-value: 4.5E-25
score: 88.6
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 1..139
score: 17.973
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 3..130
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 1..99
e-value: 1.7E-21
score: 76.5
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 100..150
e-value: 4.6E-8
score: 32.5

Blast
[Close]
BLAST of TCONS_00049268-protein vs. Swiss-Prot (Human)
Match: FCN3 (Ficolin-3 OS=Homo sapiens GN=FCN3 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 6.530e-21
Identity = 47/130 (36.15%), Postives = 70/130 (53.85%), Query Frame = 0 
Query:    1 MAFTYRMDGVKTFVRFFEKYKEGFGKPPEDYYLGNENLHQLTKSGEYELYY-LTDARDTPTTYHGWYGQFSVSDEADFYRLSIGDFREGT--NTLAISDSMQFSAHEVGKDKAGAFCALNRQGGFWYNAC 127
            + F  R DG   F R +  Y+ GFG    +++LGNENLHQLT  G +EL   L D     T  H  Y  F +  E D Y+L++G F EGT  ++L++     F+ ++   D + + CA+   G +WY +C
Sbjct:  131 LVFQRRQDGSVDFFRSWSSYRAGFGNQESEFWLGNENLHQLTLQGNWELRVELEDFNGNRTFAH--YATFRLLGEVDHYQLALGKFSEGTAGDSLSLHSGRPFTTYDADHDSSNSNCAVIVHGAWWYASC 258
The following BLAST results are available for this feature:
BLAST of TCONS_00049268-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FCN36.530e-2136.15Ficolin-3 OS=Homo sapiens GN=FCN3 PE=1 SV=2[more]
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