TCONS_00049607-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049607-protein
Unique NameTCONS_00049607-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length476

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049607-protein ID=TCONS_00049607-protein|Name=TCONS_00049607-protein|organism=Clytia hemisphaerica|type=polypeptide|length=476bp
MTESKIAISVGGYRADFVDSLPEDLKCMVCHLAYREPVQLTACGHRLCQV
CFKTMEKHYHMSDTPLLCPFDKSFIDSSQVFLDRAIGRQVLSLFVKCSNQ
LTGCSWTGELNQLQDHLLDCALEEITDEKPKLAELQDGKMGSKTSLYDLP
TQQINQSEKSLLQKLLDRIERNENATRTLTKEFEHYKEYQSKALETLNQG
LDVLTSSLKIMEVETVPDVGSRCSTLEQIVHSIANLLKEVSLKMDTKLGQ
KTYNEDLTTTRQEFDTKFENLFKKMKKLELDLVEYVDGVNMNTTLETKGN
SPASPIELMDGEFPEARISDLEKKIGRLELMNPVSGFFAWTLREFDYFQS
MLPSRKRGKLKTSCFGFECRIVLYWTNLKRRKQLGLGFEIVGRTPMTVGY
LPFFCDVIISLLDRNGEIMTRKISNSDFVPGNPVEDQEVMLRATIPDFLC
FPQHKSFVFEDTLRLFGYFKPFDPSV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031450XLOC_031450Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049607TCONS_00049607Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 155..182
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 15..104
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 27..71
e-value: 0.0065
score: 25.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 27..72
score: 10.512
IPR001841Zinc finger, RING-typeCDDcd00162RINGcoord: 26..70
e-value: 2.50846E-6
score: 43.5884
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 89..131
e-value: 1.4E-7
score: 31.1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 13..88
e-value: 2.3E-8
score: 32.9

Blast
[Close]
BLAST of TCONS_00049607-protein vs. Swiss-Prot (Human)
Match: TRAF5 (TNF receptor-associated factor 5 OS=Homo sapiens GN=TRAF5 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 3.679e-16
Identity = 46/118 (38.98%), Postives = 61/118 (51.69%), Query Frame = 0 
Query:   17 FVDSLPEDLKCMVCHLAYREPVQLTACGHRLCQVCFKTMEKHYHMSDTPLLCPFDKSFIDSSQVFLDRAIGRQVLSLFVKCSNQLTGCSWTGELNQLQDHLLDCALEEITDEKPKLAE 134
            FV+ L E  KC  CH     P Q T CGHR CQ C  ++ +   ++  P+ CP DK  I S +VF D    R+VL+L+V CSN   GC+    L + QDHL  C  + +     K  E
Sbjct:   35 FVERLEERYKCAFCHSVLHNPHQ-TGCGHRFCQHCILSLRE---LNTVPI-CPVDKEVIKSQEVFKDNCCKREVLNLYVYCSN-APGCNAKVILGRYQDHLQQCLFQPVQCSNEKCRE 146
The following BLAST results are available for this feature:
BLAST of TCONS_00049607-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TRAF53.679e-1638.98TNF receptor-associated factor 5 OS=Homo sapiens G... [more]
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