TCONS_00049615-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049615-protein
Unique NameTCONS_00049615-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length287

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049615-protein ID=TCONS_00049615-protein|Name=TCONS_00049615-protein|organism=Clytia hemisphaerica|type=polypeptide|length=287bp
MTACGTSEFTKLPEEDVLYGKIFVFLSLKDLFCLKVVCKTFDEIVTNFLI
SPFCTTFDLSIIGSGKLFNGDVFKRMIQNKRNLLKIDFTSCKHWLKDEHL
RLTVLQNVKLKKVVISSCYNISNEVFLDFGNKLNSVRVLDVSHCKSLTKE
TLVFIGNNIKTLVSIDISGCWGANDDCVEAIALNNKELKEFHSSSCYSLT
DISISTLAKSCSKLQEIDISGCWRVTNQSVFIIREYCKNLKKLYVKDCRS
INEISIASLRPRGIIIDIPAPRKYLQSSSVRSLLLQT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031457XLOC_031457Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049615TCONS_00049615Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006553Leu-rich_rpt_Cys-con_subtyp
IPR032675L_dom-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006553Leucine-rich repeat, cysteine-containing subtypeSMARTSM00367LRR_CC_2coord: 237..262
e-value: 18.0
score: 12.6
coord: 185..210
e-value: 23.0
score: 11.7
coord: 211..236
e-value: 0.11
score: 21.6
coord: 107..132
e-value: 170.0
score: 4.9
coord: 133..158
e-value: 140.0
score: 5.6
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 3..262
e-value: 2.4E-29
score: 101.5
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 47..259

Blast
[Close]
BLAST of TCONS_00049615-protein vs. Swiss-Prot (Human)
Match: FXL15 (F-box/LRR-repeat protein 15 OS=Homo sapiens GN=FBXL15 PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 7.113e-33
Identity = 68/268 (25.37%), Postives = 122/268 (45.52%), Query Frame = 0 
Query:    5 GTSEFTKLPEEDVLYGKIFVFLSLKDLFCLKVVCKTFDEIVTNFLISPFCTTFDLSIIGSGKLFNGDVFKRMIQNKRNLLKIDFTSCKHWLKDEHLRLTVLQNVKLKKVVISSCYNISNEVFLDFGNKLNSVRVLDVSHCKSLTKETLVFIGNNIKTLVSIDISGCWGANDDCVEAIALN-NKELKEFHSSSCYSLTDISISTLAKSCSKLQEIDISGCWRVTNQSVFIIREYCKNLKKLYVKDCRSINEISIASLRPRGIIIDIPAP 271
            G   F  LP EDVL   +   + L+ L  L+ V + F  +V   L       FD + +G           R++++   L ++    C  WL DE L   + +N +L+ V +  C  +S             ++ L ++HC  +    L  + +    L  +D++ C    D+ +  +A      L+    +   ++ D ++  LA++C +L  +D++GC RV +  V  + EYC  L+ L V+ C  + E S++ LR RG+ ID+  P
Sbjct:   15 GAVRFLDLPWEDVLLPHVLNRVPLRQLLRLQRVSRAFRSLVQLHLAG--LRRFDAAQVGPQ--IPRAALARLLRDAEGLQELALAPCHEWLSDEDLVPVLARNPQLRSVALGGCGQLSRRALGALAEGCPRLQRLSLAHCDWVDGLALRGLADRCPALEELDLTACRQLKDEAIVYLAQRRGAGLRSLSLAVNANVGDAAVQELARNCPELHHLDLTGCLRVGSDGVRTLAEYCPVLRSLRVRHCHHVAESSLSRLRKRGVDIDVEPP 278
The following BLAST results are available for this feature:
BLAST of TCONS_00049615-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FXL157.113e-3325.37F-box/LRR-repeat protein 15 OS=Homo sapiens GN=FBX... [more]
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