TCONS_00049618-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049618-protein
Unique NameTCONS_00049618-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length281

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049618-protein ID=TCONS_00049618-protein|Name=TCONS_00049618-protein|organism=Clytia hemisphaerica|type=polypeptide|length=281bp
MNFIRRVVNNYQRAGPHLKRYLSSEHTQGEKSYTWLLVFPVATFGLGTWQ
VRRLEWKKGLINDMKERTHSPPSPYETRDMLIPGRTAQMEYKPVYVEGVF
DHSKEILLGPRTRNDKTNRDPTGLIAHGKAEVGYHIVTPFVLDNGERILI
NRGWVDSKSKDQKTRPEGQITDHVRISGLVRKGEGRPQFSPAVKEGSLNW
NYCDVYGFSNILNTLPLIIDADDKSTVPGGPIGGQTRVTLRNEHLNYVIT
WYALSAATLLMWFQLRKRPSAMFKGPKTKEI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031460XLOC_031460Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049618TCONS_00049618Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002994Surf1/Shy1
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002994Surfeit locus 1/Shy1PFAMPF02104SURF1coord: 39..256
e-value: 3.7E-39
score: 134.7
IPR002994Surfeit locus 1/Shy1PROSITEPS50895SURF1coord: 29..269
score: 39.989
IPR002994Surfeit locus 1/Shy1CDDcd06662SURF1coord: 43..261
e-value: 2.40224E-61
score: 194.099

Blast
[Close]
BLAST of TCONS_00049618-protein vs. Swiss-Prot (Human)
Match: SURF1 (Surfeit locus protein 1 OS=Homo sapiens GN=SURF1 PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 3.028e-63
Identity = 107/244 (43.85%), Postives = 144/244 (59.02%), Query Frame = 0 
Query:   23 SSEHTQGEKSYTW-LLVFPVATFGLGTWQVRRLEWKKGLINDMKERTHSPPSPYETRDMLIPGRTAQMEYKPVYVEGVFDHSKEILLGPRTRNDKTNRDPTGLIAHGKAEVGYHIVTPF-VLDNGERILINRGWVDSKSKDQKTRPEGQITDHVRISGLVRKGEGRPQFSPAVKEGSLNWNYCDVYGFSNILNTLPLIIDADDKSTVPGGPIGGQTRVTLRNEHLNYVITWYALSAATLLMWFQ 264
            S+   + +    W LL+ PV  FGLGTWQV+R +WK  LI +++ R  + P P     M +      +EY+PV V G FDHSKE+ + PRT  D       G +     + G ++VTPF   D G  IL+NRG+V  K  + +TR +GQI   V + G+VR  E R  F P       +W+Y D+   + I    P+ IDA+ +STVPGGPIGGQTRVTLRNEHL Y++TWY LSAAT  +WF+
Sbjct:   52 SATKAEDDSFLQWVLLLIPVTAFGLGTWQVQRRKWKLNLIAELESRVLAEPVPLPADPMEL----KNLEYRPVKVRGCFDHSKELYMMPRTMVDPVREAREGGLISSSTQSGAYVVTPFHCTDLGVTILVNRGFVPRKKVNPETRQKGQIEGEVDLIGMVRLTETRQPFVPENNPERNHWHYRDLEAMARITGAEPIFIDANFQSTVPGGPIGGQTRVTLRNEHLQYIVTWYGLSAATSYLWFK 291
The following BLAST results are available for this feature:
BLAST of TCONS_00049618-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SURF13.028e-6343.85Surfeit locus protein 1 OS=Homo sapiens GN=SURF1 P... [more]
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