TCONS_00049619-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00049619-protein
Unique Name	TCONS_00049619-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	505

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00049619-protein ID=TCONS_00049619-protein|Name=TCONS_00049619-protein|organism=Clytia hemisphaerica|type=polypeptide|length=505bp
MEEEGGGYTDSDRSEYNRDRRGDRRDRGGKRRDRRPRDRFRRERDRQDSE
GHSQSNESSSIKTPIILAKKSSQALASESQKKDSPTILGIQRRASESTTS
SSPGTNTPSSSTKQTYEGYTSYQRQSKYENKADINSPSVTTTHTSHAEHY
TLSGLAALRLPSEVLPKESINVIDGSFQWSDKAFESLLDQTDYVVVGCVG
MQGAGKSTLMSLIAGQKVQSIEKTRLIFCPQKKSDWEKCIHRTVGVDVYI
TRERMILLDTQPLMSPSMLEQYLKYDRKVPSEYSTAEICLEVQALQLISF
LYTVCHSILVVQDHMMDLNLINLLKSSEMLKPSTISHNSAQDGSNNNSDD
LNNEFYPHLVFVYTSCDTRSFEYDVIKSTCQVTWKLFENSRLHVRGGPSM
LRAPLLSLHEAPTLMEGLDDVNLYFIPSLLSSKDEEDYENQLTYQGFPSS
QTIISLLRQQLSALPRTPFTHHVLSEKNWFHYAARTWEAVKKSNLIAEYH
RLLTN

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_031461	XLOC_031461	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00049619	TCONS_00049619	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.300		coord: 162..463 e-value: 6.6E-14 score: 51.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..121
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 184..261

Blast

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BLAST of TCONS_00049619-protein vs. Swiss-Prot (Human)
Match: SMG9 (Protein SMG9 OS=Homo sapiens GN=SMG9 PE=1 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 3.449e-75
Identity = 169/535 (31.59%), Postives = 274/535 (51.21%), Query Frame = 0

Query:    7 GYTDSDRSEYNRDRRGDRRDRGGKRRDRRPRDRFRR-----ERDRQDSEGHSQSNESSSIKTPIILAKKSSQ-----------ALASESQKKDSPTILGIQRRASESTTSSSPGTNTPSSST----------KQTYEGYTSYQRQSKYENKADINSPSVTTTHTSHAEHYTLSGLAALRLPSEVLPKESINVIDGSFQWSDKAFESLLDQTDYVVVGCVGMQGAGKSTLMSLIAGQKVQSIEKTRLIFCPQKKSDWEKCIHRTVGVDVYITRERMILLDTQPLMSPSMLEQYLKYDRKVPSEYSTAEICLEVQALQLISFLYTVCHSILVVQDHMMDLNLINLLKSSEMLKPSTISHNSAQDGSNNNSDDLNNEFYPHLVFVYTSCDTRSFEYDVIKSTCQVTWKLFENSRLHVRGGPSMLRAPLLSLHEAPTLMEGLDDVNLYFIPSLLSSKDEED-----------YENQLTYQGFPSSQTIISLLRQQLSALPRTPFTHHVLSEKNWFHYAARTWEAVKKSNLIAEYHRLLT 504
            G++        R RR      GG +    P  R R      ER+R+D+    +++ S   KTPIIL+K  ++           A        + P +L   R   +   + + G +TP  +           K   EG    Q   + +N+             + A    + G A L LP E + K SI ++D    W D A E LLDQTD +VVG +G+QG GKS +MSL++    +  ++T  +F  Q     E+  ++T G+D +IT+ER++ LDTQP++SPS+L+  +  DRK+P EY+     +E+Q+LQ+ +FL+TVCH ++VVQD   DL+L   L+++EM+K    + + + + S+++  D   E+YPHLVF+        F    ++    +  +L  +S L  +G  SML+  +      P  ++   +VNL+ +P + S  + E+           +     Y+G PS Q+++S LR Q+ ++ R   +H +L+EKNWFHYAAR W+ V+KS+ +AEY RLL 
Sbjct:    5 GHSQPGLYGIERRRRWKEPGSGGPQNLSGPGGRERDYIAPWERERRDAS--EETSTSVMQKTPIILSKPPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVT-GASTPEGTAPPPPAAPAPPKGEKEGQRPTQPVYQIQNRG--------MGTAAPAAMDPVVGQAKL-LPPERM-KHSIKLVDDQMNWCDSAIEYLLDQTDVLVVGVLGLQGTGKSMVMSLLSANTPEEDQRT-YVFRAQSAEMKERGGNQTSGIDFFITQERIVFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYVEMQSLQIAAFLFTVCHVVIVVQDWFTDLSLYRFLQTAEMVK--PSTPSPSHESSSSSGSDEGTEYYPHLVFLQNKARREDFCPRKLRQMHLMIDQLMAHSHLRYKGTLSMLQCNVFP-GLPPDFLD--SEVNLFLVPFMDSEAESENPPRAGPGSSPLFSLLPGYRGHPSFQSLVSKLRSQVMSMARPQLSHTILTEKNWFHYAARIWDGVRKSSALAEYSRLLA 520

The following BLAST results are available for this feature:

BLAST of TCONS_00049619-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00049619-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SMG9	3.449e-75	31.59	Protein SMG9 OS=Homo sapiens GN=SMG9 PE=1 SV=1	[more]

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TCONS_00049619-protein (polypeptide) - C. hemisphaerica