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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00049661-protein ID=TCONS_00049661-protein|Name=TCONS_00049661-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1422bp
SLDASHDDGSLGRLVNDSKDFPNAKMRIFEMENKPPRLCLFATKTIEMYD
EIQYFYGKFDQPWYHTQEMQQIEVEHNGENFPQTRKKDENQYPKIKSQMI
LNQHLKTQAEEEGRVHFDIIADDEKDLIDLTSDRDDMSDIFTPEIVSKMK
EDVQKSEELQKDQESLQSEKLHNDDKSQKKELSKEGNSQRDEKLLNAKES
PKRGESRKDKKLQHSQESPKNEGSLKEEKLQHDEESPKEELPKDEESLKD
DKSLKDKQLRTNKKPLEQKDLQKTDGSPKDDKLQKDEKLPNEEKFQKVEH
KQELVENSDDDSDEMFVLDKSDVWSNIHKDDESPKEEFTKDKESLKDNKS
SKDKQLRKNEKPLEQKDLQKTDGSPKDNKFQKDEKLPNEEEFRKVKHKQE
LTEKSDADSDEMFVLDKSDVWSNIHKDDESPKEELPKDKESLKDDKSSKD
KQLRKNEKPVEQKDLQKTDGSPKDDKLQKDEKLPNEEELRKVKHKQELIE
NSDADSDELFVLDKADVWSDNDTGNTRRSSRKRKKTIDYKGMELEHDGLE
TFGDPDFIPFEDELQVDAVVNPDDALERAIAKMNELCAQFEKEDEYRASS
PVDEMLIKNDSAIGLGSSIGEIIDTSADEQEISIREEEQDIGQIQDKNNE
NHERNIEKQRENDEKQGAGAEKQGAVAERKDDEDGKKKKKKKPKRPCPYG
CVRKQSVLSRHLKLQHKDEPAIIQILAKPKELQNKLFDNLKKEGIFKYNQ
KEMLKDNPCYMRERRSKDSAKIITANDIVVCSECKGTYSKSFKARHQIEC
GKTGGKVMXAKIITANDIVVCSECKGTYSKSFKARHQIECGKTGGKVMIP
MIPVKDMIVTEYPADFKDVINKMKLDEISKLAKTDQYILIVGARIFNGNK
CKSEKMQEVETRVRSHMRLLSRLLLKFIESLGIATDLRSMFDRTNMKHLR
YAIESLTETEANEQKSGLKVQIQNVIKLAAKTLEAHFLIEGDNNSSIMIC
EFVKVFHLVENELFNGALYKIKQKRNKSTRRPENLPDEEIVQDLKKYLLD
VMLKENFIFNPPSNEYVQVRDATCARLTMFNGRRGGEPARLFTYQWKEAL
EGLWLRPKVREQYKREVKTKNRITYQEGKGDKQVCVFFPPDTVDAMIFLC
DEKVRVEAGVSKLNKFAFPSTGNSLLHTDGWAALTTCCKKAGIDSKINGT
LNRHRVSSIMGALDMSEKDRNLSYEHFGHSEEMNKYVYQIPQAEQQLART
GEFLALIDNNHNPFENIDQPADINRPSGVVPTPDIVLSSSEIGKPSDSFS
TFNSKSENEKNGHREIGTKRQRKRKTKVESDPCDSDEDDPVQTNRSFKWS
ERLIEAFDRSFQGYVERKEKKKMPSVEEMKEFMKSNGEDERLFGKVKIRI
NNARSAVKSRAAKRAKAMGLEK Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR013762 | Integrase-like_cat |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006310 | DNA recombination |
| GO:0015074 | DNA integration |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0015074 |
DNA integration |
| biological_process |
GO:0006310 |
DNA recombination |
| molecular_function |
GO:0003677 |
DNA binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 149..169 |
| None | No IPR available | COILS | Coil | Coil | coord: 627..647 |
| None | No IPR available | COILS | Coil | Coil | coord: 573..593 |
| None | No IPR available | GENE3D | 2.170.270.10 | | coord: 2..57
e-value: 1.4E-6
score: 27.9 |
| None | No IPR available | SUPERFAMILY | 82199 | SET domain | coord: 9..61 |
| IPR013762 | Integrase-like, catalytic domain | GENE3D | 1.10.443.10 | | coord: 1035..1249
e-value: 2.1E-7
score: 30.3 |
Blast
The following BLAST results are available for this feature:
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