TCONS_00049710-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049710-protein
Unique NameTCONS_00049710-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length210

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049710-protein ID=TCONS_00049710-protein|Name=TCONS_00049710-protein|organism=Clytia hemisphaerica|type=polypeptide|length=210bp
MAESEVRRTSDPRVVRKIHSAIKKTCEQKQCPIMERIQRALAIDKVQITR
SRIELQLKNAIKDGLIIESSGKSGKTTSISESKSSSFRVPTQENFYENYE
DDGHDWYCWVCHREGEVYLCSRCPRVIHRKCAELTQEDLEGDFVCYCCND
LESTKQYGKKEIQELATMLSYTIDRMKSKCEELWKSPDEELHPTYRLFVY
QDTSLNELEK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031519XLOC_031519Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049710TCONS_00049710Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR019787Znf_PHD-finger
IPR011011Znf_FYVE_PHD
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 80..167
e-value: 2.0E-10
score: 39.9
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 105..151
score: 8.618
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 79..148

Blast
[Close]
BLAST of TCONS_00049710-protein vs. Swiss-Prot (Human)
Match: ZMY11 (Zinc finger MYND domain-containing protein 11 OS=Homo sapiens GN=ZMYND11 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 3.004e-21
Identity = 67/208 (32.21%), Postives = 99/208 (47.60%), Query Frame = 0 
Query:    1 MAESEVRRTSDPRVVRKIHSAIKKTCEQKQCPIMERI----QRALAIDKVQITRSRIELQLKNAIKDGLIIES--SGKSGKTTSISESKSSSFRVPTQENFYENYEDDGHDWYCWVCHREGEVYLCSRCPRVIHRKCA--ELTQEDLEGDFVCYCCNDLESTKQYGKKEIQELATMLSYTIDRMKSKCEELWKSPDEELHPTYRLFVY 200
            MA    RR +D + ++ + +AI+    QKQ   ++RI     R   +   + TR     QL  A+KDGLI+E+   G  G    I +     + +P  E    ++E + HDWYC+ CH  GEV +C  C RV H KC   E    D    + C  C  ++  K   K   QE+ T L + + RMK +  +L K   +  HP YR  V+
Sbjct:    1 MARLTKRRQADTKAIQHLWAAIEIIRNQKQIANIDRITKYMSRVHGMHPKETTR-----QLSLAVKDGLIVETLTVGCKGSKAGIEQE---GYWLPGDEI---DWETENHDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRDSSSPWQCPVCRSIKK-KNTNK---QEMGTYLRFIVSRMKERAIDLNKKGKDNKHPMYRRLVH 193
The following BLAST results are available for this feature:
BLAST of TCONS_00049710-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZMY113.004e-2132.21Zinc finger MYND domain-containing protein 11 OS=H... [more]
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