TCONS_00049757-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049757-protein
Unique NameTCONS_00049757-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length384

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049757-protein ID=TCONS_00049757-protein|Name=TCONS_00049757-protein|organism=Clytia hemisphaerica|type=polypeptide|length=384bp
YEFELDPSTDVHTMMPGNYWLIDQRSLGGKPGSVSLKKDKQNLIGISIGG
GAPLCPCLYVVQVFDNTPAAKDGTLQAGDEIVGVNGKSMKGKTKVDVARA
IQSQKEIVTIQYVKLHADPKEGKSLDIILKKVKHKMVENISSGTADALGL
SRAILCNDGLVKKLEELEQNSFIYKGIVEHSKRLLQSYFQMSNLHKELGD
IFASIGVRELQPNASEGFAIFAECHRGFNKSGFDFLKKMKPMLSDLNTYL
TKAIPDTKLTIQKYLDAKFEYLSYCLKVKEMDDEEYGYAALHESLYRVET
GNYDYRVVLRCRQLARERFAKLRSDVLVKLELLDNKHVQDLVFQLQKMLE
AMTTYHNECEDELSKATIFPIEVDLCGGAMARDD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031551XLOC_031551Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049757TCONS_00049757Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010504AH_dom
IPR001478PDZ
IPR027267AH/BAR-dom
Vocabulary: Molecular Function
TermDefinition
GO:0019904protein domain specific binding
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0019904 protein domain specific binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010504Arfaptin homology (AH) domainSMARTSM01015Arfaptin_2coord: 128..363
e-value: 1.2E-101
score: 353.7
IPR010504Arfaptin homology (AH) domainPFAMPF06456Arfaptincoord: 129..362
e-value: 1.9E-72
score: 243.5
IPR010504Arfaptin homology (AH) domainPROSITEPS50870AHcoord: 155..368
score: 35.494
IPR001478PDZ domainSMARTSM00228pdz_newcoord: 42..116
e-value: 4.5E-14
score: 62.7
IPR001478PDZ domainPFAMPF00595PDZcoord: 34..110
e-value: 1.3E-11
score: 44.6
IPR001478PDZ domainPROSITEPS50106PDZcoord: 33..116
score: 17.551
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 7..113
NoneNo IPR availableGENE3D1.20.1270.60coord: 103..368
e-value: 6.5E-17
score: 61.2
NoneNo IPR availableGENE3D2.30.42.10coord: 30..102
e-value: 1.7E-16
score: 59.7
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 34..110
e-value: 3.27316E-15
score: 69.1326
NoneNo IPR availableCDDcd07659BAR_PICK1coord: 157..371
e-value: 7.73269E-132
score: 378.591
IPR027267Arfaptin homology (AH) domain/BAR domainSUPERFAMILY103657BAR/IMD domain-likecoord: 153..363

Blast
[Close]
BLAST of TCONS_00049757-protein vs. Swiss-Prot (Human)
Match: PICK1 (PRKCA-binding protein OS=Homo sapiens GN=PICK1 PE=1 SV=2)

HSP 1 Score: 501.516 bits (1290), Expect = 3.969e-178
Identity = 237/351 (67.52%), Postives = 286/351 (81.48%), Query Frame = 0 
Query:   31 PGSVSLKKDKQNLIGISIGGGAPLCPCLYVVQVFDNTPAAKDGTLQAGDEIVGVNGKSMKGKTKVDVARAIQSQKEIVTIQYVKLHADPKEGKSLDIILKKVKHKMVENISSGTADALGLSRAILCNDGLVKKLEELEQNSFIYKGIVEHSKRLLQSYFQMSNLHKELGDIFASIGVRELQPNASEGFAIFAECHRGFNKSGFDFLKKMKPMLSDLNTYLTKAIPDTKLTIQKYLDAKFEYLSYCLKVKEMDDEEYGYAALHESLYRVETGNYDYRVVLRCRQLARERFAKLRSDVLVKLELLDNKHVQDLVFQLQKMLEAMTTYHNECEDELSKATIFPIEVDLCGGAMA 381
            PG V+L+KD QNLIGISIGGGA  CPCLY+VQVFDNTPAA DGT+ AGDEI GVNG+S+KGKTKV+VA+ IQ  K  VTI Y KL ADPK+G SLDI+LKKVKH++VEN+SSGTADALGLSRAILCNDGLVK+LEELE+ + +YKG+ EH+K LL++++++S  H+  GD+F+ IGVRE QP ASE F  FA+ HR   K G   LK +KPML+DLNTYL KAIPDT+LTI+KYLD KFEYLSYCLKVKEMDDEEY   AL E LYRV TGNY+YR++LRCRQ AR RF+++R DVL K+ELLD KHVQD+VFQLQ+++  M+ Y+N+C   L  A +FPIEVDL    +A
Sbjct:   20 PGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQADPKQGMSLDIVLKKVKHRLVENMSSGTADALGLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLRAFYELSQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIEKFGIRLLKTIKPMLTDLNTYLNKAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRVSTGNYEYRLILRCRQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYNDCYAVLRDADVFPIEVDLAHTTLA 370
The following BLAST results are available for this feature:
BLAST of TCONS_00049757-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PICK13.969e-17867.52PRKCA-binding protein OS=Homo sapiens GN=PICK1 PE=... [more]
back to top