TCONS_00049768-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049768-protein
Unique NameTCONS_00049768-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1234

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049768-protein ID=TCONS_00049768-protein|Name=TCONS_00049768-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1234bp
QASPETSDKETICYCDHLTDFGGGGPFAEPNPIDFGAALSGFGNIGDNPT
VFSVVLSIFGLYLIMLVWARWKDKKDIAMNALYPLEDNHPNDTYFYELSV
STGYQSNAGTTSELFITLHGTLGESSPRKLTPTDRKCFQKAGQDNFLLAV
PYSLGDLKAIEIWHNNTGASPGWFHMETNIRDTTTMKKYIFVSNQWFDVA
EEDGLISRKVERAAKSDLVDFNFMFAKTLRKNLYDGHIWFSIFTRPATST
FTRCQRLAACLALLLSTMLANAMFYTGDEAGPPSASVVIGPFTISIEMIR
VGVTSALIVVPAHLLVILLFKKAGPKKIKQESEEEGEMGDDALNASQVKW
DDKSVADIQGVELPLEDEEAKEEESSAQKRNSFVKFLRSILFSGREDEED
ELLRKKKKPLPHWLVYIGFFTCFVISMVCGFFVMLYGFAFGKVKSDKWIV
AMMISFAQSVFLLQPVKVVVLSVAFSLMVKDPTRGDDDDSLAPAKQKKKK
KDNAEKIDSDEDSELEEEAENITKKKKKLDEFKLPEERKLEEARMARLAE
KRVKLILKEIIIHFAFLSLCLMVAYAAADPYSFNLAKATKEAAMENAILK
SYKDGKAYNEEVQRVVKNADGVMNRLEWFDWARYSVIDYLFPFGWYNWDT
TREFEYKKGFTADTMASKVMAMARFRQLRVKKDSCQKHPVFEHLVEECNA
GYSWSVEQQENYSPGWQPDLNKTMRYRARRGKRKALYLGLEDPWRYKTSS
ELQAFPFMGKFKTYAGGSYAVSIGPTKRIAKKIIESMKENFWVDRYTRAI
ITEANIYNANTNLLLIATFLHEILPTGGWSHYYNIQSLRLYRYVGGLGQM
ILLFDIIFVIVTFIGWYKVAKHSRKMGGFKKYLANAWNLLHFIVTFCSTG
AIVCTIGRKLFVRWAVENYVAEPEMYTSFATVAQLEYFIMGFIGFVVFFT
NLEFLRILRFNRRVGLLTKTVAIIGAPMASFGVLFIVVFMAYVSFAHCVY
SDKLEGYSTIMFTFVSLTEMFMGAFDINELVDQAPFFGPIMFFTYIVLIV
MILMNMFIGIICDAFAAVREESDEEEETDVMKFMSQRMKKFTGIAGGPMA
PIYSDWKSDWEITMEKLEDRCENCLYAMKNVENEEIRTDKWFRIADPKKR
SMLAGLVGSEYLLYENELIDALQVIDRRLKRMSPDDAEEFLQAAARMRAH
EKAEEEEEDDDESDDEESEYETEESGEDSGEETE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031556XLOC_031556Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049768TCONS_00049768Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003915PKD_2
IPR001024PLAT/LH2_dom
IPR013122PKD1_2_channel
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1114..1134
NoneNo IPR availableGENE3D1.10.287.70coord: 734..1069
e-value: 2.8E-7
score: 29.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 483..520
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1190..1234
IPR003915Polycystic kidney disease type 2 proteinPRINTSPR01433POLYCYSTIN2coord: 1041..1062
score: 40.91
coord: 662..681
score: 29.0
coord: 980..1001
score: 31.82
IPR001024PLAT/LH2 domainSMARTSM00308LH2_4coord: 94..208
e-value: 7.2E-5
score: 24.9
IPR001024PLAT/LH2 domainPFAMPF01477PLATcoord: 96..201
e-value: 3.8E-15
score: 56.4
IPR001024PLAT/LH2 domainGENE3D2.60.60.20coord: 93..239
e-value: 2.5E-31
score: 107.9
IPR001024PLAT/LH2 domainPROSITEPS50095PLATcoord: 94..211
score: 31.38
IPR001024PLAT/LH2 domainSUPERFAMILY49723Lipase/lipooxygenase domain (PLAT/LH2 domain)coord: 92..205
IPR013122Polycystin cation channel, PKD1/PKD2PFAMPF08016PKD_channelcoord: 629..1068
e-value: 1.3E-76
score: 257.9

Blast
BLAST of TCONS_00049768-protein vs. Swiss-Prot (Human)
Match: PK1L2 (Polycystic kidney disease protein 1-like 2 OS=Homo sapiens GN=PKD1L2 PE=1 SV=4)

HSP 1 Score: 270.396 bits (690), Expect = 1.124e-73
Identity = 166/692 (23.99%), Postives = 316/692 (45.66%), Query Frame = 0
Query:  403 LRKKKKPLPHWLVYIGFFTCFVISMVCGFFVMLYGFAFGKVKSDKWIVAMMISFAQSVFLLQPVKVVVLSVAFSLMVKDPTRGDDDDSLAPAKQKKKKKDNAEKIDSDEDSELEEEAENITKKKKKLDEFKLPEERKLEEARMARLAEKRVKLILKEIIIHFAFLSLCLMVAYAAADPYSFNLAKATKEAAMENAILKSYKDGKAYNEEVQRVVKNADGVMNRLEWFDWARYSVIDYLFPFGWYNWDTTREFEYKKGFTADTMASKVMAMARFRQLRVKKDSCQKHPVFEHLVEECNAGYSWSVEQQENYSPGWQPDLNKTMRYRARRGKRKALYLGLEDPWRYKTSSELQAFPFMGKFKTYAGGSYAVSIGPTKRIAKKIIESMKENFWVDRYTRAIITEANIYNANTNLLLIATFLHEILPTGGWSHYYNIQSLRLYRYVGGLGQMILLFDIIFVIVTFIGWYKVAKHSRKMGGFKKYLANAWNLLHFIVTFCSTGAIVCTIGRKLFVRWAVENYVAEPEMYTSFATVAQLEYFIMGFIGFVVFFTNLEFLRILRFNRRVGLLTKTVAIIGAPMASFGVLFIVVFMAYVSFAHCVYSDKLEGYSTIMFTFVSLTEMFMGAFDINELVDQAPFFGPIMFFTYIVLIVMILMNMFIGIICDAFAAVREESDEEEETDVMKFMSQRMKKFTGI 1094
            + K  + LP W + +G+      S V  FF MLYG  +G+  S +W+++M +SF +S+F+ QP+KV+  +  F+L++K     D++D++AP        D      +              ++    D ++ P    +E+ +   L E++   +++EI+ +  FL + L+VAY   DP +++L +  + +                        +   GV+   E+F WA  +++  L             + +  GF  D   SK++  A+ RQ+RV++ SC      +  +  C A YS   E   +Y  GW    N T                    W+Y++  + Q +P  GK   Y GG Y V +G  ++   KI+  + +N W+D  TRA+  E+ +YNAN NL  I T   E    G +  +  +QSLRLY +  G    ++  ++I+ +  F+ +Y V +  R       Y  + WNLL   +   S  A+   + R +     ++      E   SF+  A  +  +   I F+V  + ++   +LR N ++ ++T  +      ++ F ++ + + +AY   ++ ++  KL  Y T+     ++  + +G F+  E++D +P  G  +  + IV +  +++N+FI +I  AF+  ++     EE +++  +  ++  F GI
Sbjct: 1810 VSKPPQGLPWWCILVGWLLVAATSGVAAFFTMLYGLHYGRASSLRWLISMAVSFVESMFVTQPLKVLGFAAFFALVLKR--VDDEEDTVAPLPGHLLGPDPYALFRA--------------RRNSSRDVYQPPLTAAIEKMKTTHLKEQKAFALIREILAYLGFLWMLLLVAYGQRDPSAYHLNRHLQHS----------------------FTRGFSGVLGFREFFKWANTTLVSNL-------------YGHPPGFITDG-NSKLVGSAQIRQVRVQESSCPLAQQPQAYLNGCRAPYSLDAEDMADYGEGW----NATTLSE----------------WQYQSQDQRQGYPIWGKLTVYRGGGYVVPLGTDRQKHVKILRYLFDNTWLDALTRAVFVESTVYNANVNLFCIVTLTLETSALGTFFTHAALQSLRLYPFTDGWHPFVVAAELIYFL--FLLYYMVVQGKRMSKETWGYFCSKWNLLELAIILASWSALAVFVKRAVLAERDLQRCRNHREEGISFSETAAADAALGYIIAFLVLLSTVKLWHLLRLNPKMNMITAALRRAWGDISGFMIVILTMLLAYSIASNLIFGWKLRSYKTLFDAAETMVSLQLGIFNYEEVLDYSPVLGSFLIGSCIVFMTFVVLNLFISVILVAFSEEQKYYQLSEEGEIVDLLLMKILSFLGI 2427          

HSP 2 Score: 211.846 bits (538), Expect = 2.615e-55
Identity = 113/352 (32.10%), Postives = 189/352 (53.69%), Query Frame = 0
Query:    1 QASPETSDKETICYCDHLTDFGGGGPFAEPNPIDFGAALSGFGNIGDNPTVFSVVLSIFGLYLIMLVWARWKDKKDIAMNALYPLEDNHPNDTYFYELSVSTGYQSNAGTTSELFITLHGTLGESSPRKLTPTDRKCFQKAGQDNFLLAVPYSLGDLKAIEIWHNNTGASPGWFHMETNIRDTTTMKKYIFVSNQWFDVAEEDGLISRKVERAAKSDLVDFNFMFAKTLRKNLYDGHIWFSIFTRPATSTFTRCQRLAACLALLLSTMLANAMFYTGDEAGPPSASVVIGPFTISIEMIRVGVTSALIVVPAHLLVILLFKKAGPKKIKQESEEEGEMGDDALNASQVKWDD 352
            Q  P TS  +T C C+HLT FG        N I+       F    DNP V + V  +  +Y+++++WAR KD +D A   +  LEDN P   Y Y ++V TG++  A T+S++ +TL+G  GE  P  L   D   F++   D FLL+  + LG+L+++ +WH+N+G  P W+     + D    +K+ F+ N W  +   D ++ +    A + D   F+ +F         DGHIW+SIF+R A S+FTR QR++ C +LLL TML + MF+ G    P    + +G    + + + +G+ S++++ P +LL++ +F+   P+  K+++  + + G   L  S    +D
Sbjct: 1298 QVGPRTSPYQTHCLCNHLTFFGSTF-LVMSNAINIHQTAELFATFEDNPVVVTTVGCLCVVYVLVVIWARRKDAQDQAKVKVTVLEDNDPFAQYHYLVTVYTGHRRGAATSSKVTVTLYGLDGEREPHHLADPDTPVFERGAVDAFLLSTLFPLGELRSLRLWHDNSGDRPSWYVSRVLVYDLVMDRKWYFLCNSWLSINVGDCVLDKVFPVATEQDRKQFSHLFFMKTSAGFQDGHIWYSIFSRCARSSFTRVQRVSCCFSLLLCTMLTSIMFW-GVPKDPAEQKMDLGKIEFTWQEVMIGLESSILMFPINLLIVQIFQNTRPRVAKEQNTGKWDRGSPNLTPSPQPMED 1647          
The following BLAST results are available for this feature:
BLAST of TCONS_00049768-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PK1L21.124e-7323.99Polycystic kidney disease protein 1-like 2 OS=Homo... [more]
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