TCONS_00049770-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00049770-protein
Unique Name	TCONS_00049770-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	486

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00049770-protein ID=TCONS_00049770-protein|Name=TCONS_00049770-protein|organism=Clytia hemisphaerica|type=polypeptide|length=486bp
FNMQRFIQRHVGNKIKKYVFHYKTTRLNTSTLSSAAGFNNYDEAVKNYTC
EVPNDFNFAEHVLEEWKRKEQLGKRDANHPAFWWVDDAGNELQYSFSELL
AQSNKVSNILYGDLGIQKGECVIVVLPRIPEWWLVNIACLKIGAILCPGT
TSLTAKDLFGRLNASKATCIITTPEIASLVDQIPDVDVPNLKRKISVGGA
ERDGWLPMHSLMRNASPEFKTLPCKSEDPMSWFFTSGTTGLPKMTEHTHA
SYGFAHRDTGRYWLDLTENDTMWNLSDTGWAKSAYSSVYAPWWQGSCVFV
YNAPRFDAKETLRVLEKYSISVTCLPPTAYRMFANEDVSSYKFKALRHCV
SAGEPLNPEIIDYWYRTTGISIREGYGQTEMTLSCGMFRCLDMKAGSMGK
PTPGYDIQIIDNKGNKMKPGEEGNVAVNCSPKPPVGLFSKYVDDPERTSA
AFCGNFYLTGDRGYMDEDGYLWFVGRADDVIXRLHG

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_031557	XLOC_031557	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00049770	TCONS_00049770	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000873	AMP-dep_Synth/Lig

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
molecular_function	GO:0003824	catalytic activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.980		coord: 238..392 e-value: 1.6E-37 score: 128.2
None	No IPR available	GENE3D	2.30.38.10		coord: 393..476 e-value: 1.5E-21 score: 75.7
None	No IPR available	GENE3D	3.40.50.980		coord: 66..237 e-value: 1.8E-32 score: 111.8
None	No IPR available	SUPERFAMILY	56801	Acetyl-CoA synthetase-like	coord: 45..483
IPR000873	AMP-dependent synthetase/ligase	PFAM	PF00501	AMP-binding	coord: 74..482 e-value: 9.3E-79 score: 264.9

Blast

[Close]

BLAST of TCONS_00049770-protein vs. Swiss-Prot (Human)
Match: ACSM3 (Acyl-coenzyme A synthetase ACSM3, mitochondrial OS=Homo sapiens GN=ACSM3 PE=1 SV=2)

HSP 1 Score: 500.36 bits (1287), Expect = 1.648e-173
Identity = 226/449 (50.33%), Postives = 311/449 (69.27%), Query Frame = 0

Query:   33 SSAAGFNNYDEAVKNYTCEVPNDFNFAEHVLEEWKRKEQLGKRDANHPAFWWVDDAGNELQYSFSELLAQSNKVSNILYGDLGIQKGECVIVVLPRIPEWWLVNIACLKIGAILCPGTTSLTAKDLFGRLNASKATCIITTPEIASLVDQIPDVDVPNLKRKISVGGAERDGWLPMHSLMRNASPEFKTLPCKSEDPMSWFFTSGTTGLPKMTEHTHASYGFAHRDTGRYWLDLTENDTMWNLSDTGWAKSAYSSVYAPWWQGSCVFVYNAPRFDAKETLRVLEKYSISVTCLPPTAYRMFANEDVSSYKFKALRHCVSAGEPLNPEIIDYWYRTTGISIREGYGQTEMTLSCGMFRCLDMKAGSMGKPTPGYDIQIIDNKGNKMKPGEEGNVAVNCSPKPPVGLFSKYVDDPERTSAAFCGNFYLTGDRGYMDEDGYLWFVGRADDVI 481
            ++   F+NY+   +++   +P  FNFA+ VL++W  KE+ GK+ +N PAFWW++  G E+++SF EL + S K +NIL     +Q+G+ VI++LPR+PEWWL N+ACL+ G +L PGTT LT KD+  RL +SKA CIIT   +A  VD +      NL  K+ V    R+GW  +  LM++AS     +  K  + M+ FFTSGT+G PKMT HTH+S+G      GR+WLDLT +D MWN SDTGWAKSA+SSV++PW QG+CVF ++ PRF+    L+ L KY I+V C  PT YRM    D++SYKFK+L+HCVSAGEP+ P++ + W   TG+ I EGYGQTE  L CG F+ + +K GSMGKP+P +D++I+D  GN + PG+EG++ +   P  P GLF+ YVD+P +T++   GNFY+TGDRGYMD+DGY WFV RADDVI
Sbjct:   35 ATPQNFSNYESMKQDFKLGIPEYFNFAKDVLDQWTDKEKAGKKPSN-PAFWWINRNGEEMRWSFEELGSLSRKFANILSEACSLQRGDRVILILPRVPEWWLANVACLRTGTVLIPGTTQLTQKDILYRLQSSKANCIITNDVLAPAVDAVAS-KCENLHSKLIVSENSREGWGNLKELMKHASDSHTCVKTKHNEIMAIFFTSGTSGYPKMTAHTHSSFGLGLSVNGRFWLDLTPSDVMWNTSDTGWAKSAWSSVFSPWIQGACVFTHHLPRFEPTSILQTLSKYPITVFCSAPTVYRMLVQNDITSYKFKSLKHCVSAGEPITPDVTEKWRNKTGLDIYEGYGQTETVLICGNFKGMKIKPGSMGKPSPAFDVKIVDVNGNVLPPGQEGDIGIQVLPNRPFGLFTHYVDNPSKTASTLRGNFYITGDRGYMDKDGYFWFVARADDVI 481

The following BLAST results are available for this feature:

BLAST of TCONS_00049770-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00049770-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ACSM3	1.648e-173	50.33	Acyl-coenzyme A synthetase ACSM3, mitochondrial OS...	[more]

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TCONS_00049770-protein (polypeptide) - C. hemisphaerica