TCONS_00049801-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049801-protein
Unique NameTCONS_00049801-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length276

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049801-protein ID=TCONS_00049801-protein|Name=TCONS_00049801-protein|organism=Clytia hemisphaerica|type=polypeptide|length=276bp
LLFNRRHVPLSPQVIPFCLDLEKLRKMGEARDECTICLFDVDGTLTMPRQ
VITSDMEDFIKELQKKVLVGIVGGSDLKKIKEQMAGEHCIKIFDYVFAEN
GLVAYKNGELLEIQNLSKYVGDDKLQEFINYCLEYMSTLKIPRKRGTFVE
FRNGMLNICPVGRSCSQEERIEFNKYDQEHNIRKNFVAALEKRFPDSGLK
YSIGGQISFDVFPKGWDKTYCLRFIDTSKIKTIHFFGDKTWEGGNDFEIF
ADKRTLGHTVTSPEDTKKQLTELFFK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031570XLOC_031570Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049801TCONS_00049801Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006379HAD-SF_hydro_IIB
IPR005002PMM
IPR023214HAD-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004615phosphomannomutase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0009298GDP-mannose biosynthetic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009298 GDP-mannose biosynthetic process
cellular_component GO:0005737 cytoplasm
molecular_function GO:0004615 phosphomannomutase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006379HAD-superfamily hydrolase, subfamily IIBTIGRFAMTIGR01484TIGR01484coord: 38..251
e-value: 3.9E-26
score: 90.4
IPR005002PhosphomannomutasePFAMPF03332PMMcoord: 56..275
e-value: 4.5E-106
score: 353.5
IPR005002PhosphomannomutaseSFLDSFLDG01143C2.B.3:_Phosphomannomutase_Licoord: 30..275
e-value: 0.0
score: 355.3
IPR023214HAD-like domainGENE3D3.40.50.1000coord: 22..276
e-value: 8.9E-29
score: 99.6
IPR023214HAD-like domainSUPERFAMILY56784HAD-likecoord: 36..273
NoneNo IPR availableSFLDSFLDF00445alpha-phosphomannomutasecoord: 32..275
e-value: 0.0
score: 398.3
NoneNo IPR availableCDDcd01427HAD_likecoord: 36..121
e-value: 1.20845E-8
score: 50.4463

Blast
[Close]
BLAST of TCONS_00049801-protein vs. Swiss-Prot (Human)
Match: PMM2 (Phosphomannomutase 2 OS=Homo sapiens GN=PMM2 PE=1 SV=1)

HSP 1 Score: 313.153 bits (801), Expect = 2.999e-108
Identity = 144/241 (59.75%), Postives = 193/241 (80.08%), Query Frame = 0 
Query:   35 TICLFDVDGTLTMPRQVITSDMEDFIKELQKKVLVGIVGGSDLKKIKEQMAGEHCIKIFDYVFAENGLVAYKNGELLEIQNLSKYVGDDKLQEFINYCLEYMSTLKIPRKRGTFVEFRNGMLNICPVGRSCSQEERIEFNKYDQEHNIRKNFVAALEKRFPDSGLKYSIGGQISFDVFPKGWDKTYCLRFIDTSKIKTIHFFGDKTWEGGNDFEIFADKRTLGHTVTSPEDTKKQLTELFF 275
             +CLFDVDGTLT PRQ IT +M+DF+++L++K+ +G+VGGSD +K++EQ+ G   ++ +DYVF ENGLVAYK+G+LL  QN+  ++G+  +Q+ INYCL Y++ +K+P+KRGTF+EFRNGMLN+ P+GRSCSQEERIEF + D++ NIR+ FVA L K F   GL +SIGGQISFDVFP GWDK YCLR ++    KTI+FFGDKT  GGND EIF D RT+G++VT+PEDT++ + EL F
Sbjct:    7 ALCLFDVDGTLTAPRQKITKEMDDFLQKLRQKIKIGVVGGSDFEKVQEQL-GNDVVEKYDYVFPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRR-ICELLF 245
The following BLAST results are available for this feature:
BLAST of TCONS_00049801-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PMM22.999e-10859.75Phosphomannomutase 2 OS=Homo sapiens GN=PMM2 PE=1 ... [more]
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