TCONS_00049803-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049803-protein
Unique NameTCONS_00049803-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length166

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049803-protein ID=TCONS_00049803-protein|Name=TCONS_00049803-protein|organism=Clytia hemisphaerica|type=polypeptide|length=166bp
MQILVKILPFLFLVTQQAQGKSISQAGLDLIKRFEGLRLTAYQDAVGVWT
IGYGHTKGVRAGQTITAEQAELFLRQDVRSAENDVEKSVKVWINQNQYDA
LVSWTFNLGGTNLRKSTMLKKLNAGDFDRVPCEMIRWVYAGGKKLPGLVK
RRYAEATLFNDGPFFC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031572XLOC_031572Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049803TCONS_00049803Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023347Lysozyme_dom
IPR002196Glyco_hydro_24
IPR033907Endolysin_autolysin
IPR023346Lysozyme-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003796lysozyme activity
Vocabulary: Biological Process
TermDefinition
GO:0016998cell wall macromolecule catabolic process
GO:0009253peptidoglycan catabolic process
GO:0044659cytolysis by virus of host cell
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016998 cell wall macromolecule catabolic process
biological_process GO:0044659 cytolysis by virus of host cell
biological_process GO:0009253 peptidoglycan catabolic process
molecular_function GO:0003796 lysozyme activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023347Lysozyme domainGENE3D1.10.530.40coord: 2..163
e-value: 1.1E-57
score: 193.9
IPR002196Glycoside hydrolase, family 24PFAMPF00959Phage_lysozymecoord: 48..152
e-value: 5.0E-22
score: 78.3
IPR033907Endolysin/autolysinCDDcd00737endolysin_autolysincoord: 23..155
e-value: 1.87578E-67
score: 202.865
IPR023346Lysozyme-like domainSUPERFAMILY53955Lysozyme-likecoord: 12..162

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049803-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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